Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.52■□□□□ 0.56
COL8A2P25067 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.52■□□□□ 0.56
COL8A2P25067 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
COL8A2P25067 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL8A2P25067 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.52■□□□□ 0.55
COL8A2P25067 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.51■□□□□ 0.55
COL8A2P25067 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
COL8A2P25067 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL8A2P25067 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL8A2P25067 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL8A2P25067 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL8A2P25067 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL8A2P25067 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
COL8A2P25067 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL8A2P25067 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.51■□□□□ 0.55
COL8A2P25067 AL354811.1-201ENST00000610286 706 ntBASIC18.51■□□□□ 0.55
COL8A2P25067 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL8A2P25067 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL8A2P25067 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL8A2P25067 AC092068.2-201ENST00000590491 1708 ntBASIC18.51■□□□□ 0.55
COL8A2P25067 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
COL8A2P25067 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.5■□□□□ 0.55
COL8A2P25067 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL8A2P25067 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL8A2P25067 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
COL8A2P25067 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL8A2P25067 YBX1P1-201ENST00000445822 960 ntBASIC18.5■□□□□ 0.55
COL8A2P25067 AL162430.1-201ENST00000480705 870 ntBASIC18.5■□□□□ 0.55
COL8A2P25067 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.5■□□□□ 0.55
COL8A2P25067 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.5■□□□□ 0.55
COL8A2P25067 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.5■□□□□ 0.55
COL8A2P25067 AL031602.1-201ENST00000633169 911 ntBASIC18.5■□□□□ 0.55
COL8A2P25067 AC105233.4-201ENST00000642045 216 ntBASIC18.5■□□□□ 0.55
COL8A2P25067 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
COL8A2P25067 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL8A2P25067 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL8A2P25067 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
COL8A2P25067 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.49■□□□□ 0.55
COL8A2P25067 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL8A2P25067 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
COL8A2P25067 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.49■□□□□ 0.55
COL8A2P25067 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL8A2P25067 AC027612.3-201ENST00000413684 1047 ntBASIC18.49■□□□□ 0.55
COL8A2P25067 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.49■□□□□ 0.55
COL8A2P25067 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.49■□□□□ 0.55
COL8A2P25067 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.49■□□□□ 0.55
COL8A2P25067 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.49■□□□□ 0.55
COL8A2P25067 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL8A2P25067 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL8A2P25067 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL8A2P25067 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.49■□□□□ 0.55
COL8A2P25067 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL8A2P25067 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL8A2P25067 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.49■□□□□ 0.55
COL8A2P25067 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL8A2P25067 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL8A2P25067 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COL8A2P25067 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
COL8A2P25067 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
COL8A2P25067 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL8A2P25067 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.48■□□□□ 0.55
COL8A2P25067 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL8A2P25067 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.48■□□□□ 0.55
COL8A2P25067 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COL8A2P25067 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.48■□□□□ 0.55
COL8A2P25067 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.48■□□□□ 0.55
COL8A2P25067 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COL8A2P25067 AC104564.3-201ENST00000582367 638 ntBASIC18.48■□□□□ 0.55
COL8A2P25067 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.48■□□□□ 0.55
COL8A2P25067 AC068587.7-201ENST00000641602 218 ntBASIC18.48■□□□□ 0.55
COL8A2P25067 C9orf163-202ENST00000624034 2573 ntBASIC18.48■□□□□ 0.55
COL8A2P25067 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
COL8A2P25067 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COL8A2P25067 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL8A2P25067 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL8A2P25067 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL8A2P25067 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.48■□□□□ 0.55
COL8A2P25067 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
COL8A2P25067 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.48■□□□□ 0.55
COL8A2P25067 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COL8A2P25067 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL8A2P25067 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL8A2P25067 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL8A2P25067 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL8A2P25067 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
COL8A2P25067 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.47■□□□□ 0.55
COL8A2P25067 AC034268.1-201ENST00000441047 882 ntBASIC18.47■□□□□ 0.55
COL8A2P25067 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.47■□□□□ 0.55
COL8A2P25067 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.47■□□□□ 0.55
COL8A2P25067 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COL8A2P25067 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
COL8A2P25067 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.47■□□□□ 0.55
COL8A2P25067 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COL8A2P25067 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COL8A2P25067 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL8A2P25067 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL8A2P25067 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.46■□□□□ 0.55
COL8A2P25067 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL8A2P25067 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL8A2P25067 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms