Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CHGBP05060 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CHGBP05060 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CHGBP05060 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
CHGBP05060 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC26.47■■□□□ 1.83
CHGBP05060 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC26.47■■□□□ 1.83
CHGBP05060 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
CHGBP05060 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CHGBP05060 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CHGBP05060 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC26.46■■□□□ 1.83
CHGBP05060 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHGBP05060 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHGBP05060 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHGBP05060 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHGBP05060 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC26.46■■□□□ 1.83
CHGBP05060 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC26.46■■□□□ 1.83
CHGBP05060 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC26.46■■□□□ 1.83
CHGBP05060 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CHGBP05060 MPST-208ENST00000628507 698 ntTSL 5 BASIC26.46■■□□□ 1.83
CHGBP05060 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC26.46■■□□□ 1.83
CHGBP05060 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHGBP05060 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHGBP05060 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
CHGBP05060 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
CHGBP05060 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
CHGBP05060 LINC01960-201ENST00000563759 1884 ntBASIC26.45■■□□□ 1.83
CHGBP05060 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CHGBP05060 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
CHGBP05060 RHOF-204ENST00000537265 699 ntTSL 2 BASIC26.45■■□□□ 1.82
CHGBP05060 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC26.45■■□□□ 1.82
CHGBP05060 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
CHGBP05060 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC26.45■■□□□ 1.82
CHGBP05060 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC26.44■■□□□ 1.82
CHGBP05060 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHGBP05060 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
CHGBP05060 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CHGBP05060 RBM38-205ENST00000440234 686 ntTSL 2 BASIC26.44■■□□□ 1.82
CHGBP05060 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHGBP05060 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
CHGBP05060 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC26.44■■□□□ 1.82
CHGBP05060 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHGBP05060 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHGBP05060 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CHGBP05060 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC26.43■■□□□ 1.82
CHGBP05060 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.43■■□□□ 1.82
CHGBP05060 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
CHGBP05060 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CHGBP05060 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC26.43■■□□□ 1.82
CHGBP05060 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC26.43■■□□□ 1.82
CHGBP05060 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC26.43■■□□□ 1.82
CHGBP05060 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
CHGBP05060 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
CHGBP05060 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
CHGBP05060 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC26.42■■□□□ 1.82
CHGBP05060 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
CHGBP05060 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
CHGBP05060 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CHGBP05060 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CHGBP05060 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC26.42■■□□□ 1.82
CHGBP05060 IGHV3-19-201ENST00000521488 291 ntBASIC26.42■■□□□ 1.82
CHGBP05060 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
CHGBP05060 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
CHGBP05060 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CHGBP05060 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC26.41■■□□□ 1.82
CHGBP05060 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CHGBP05060 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
CHGBP05060 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
CHGBP05060 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
CHGBP05060 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
CHGBP05060 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CHGBP05060 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CHGBP05060 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC26.41■■□□□ 1.82
CHGBP05060 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
CHGBP05060 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CHGBP05060 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CHGBP05060 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CHGBP05060 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CHGBP05060 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CHGBP05060 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC26.4■■□□□ 1.82
CHGBP05060 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CHGBP05060 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CHGBP05060 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CHGBP05060 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
CHGBP05060 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CHGBP05060 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CHGBP05060 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC26.4■■□□□ 1.82
CHGBP05060 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CHGBP05060 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CHGBP05060 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CHGBP05060 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CHGBP05060 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
CHGBP05060 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CHGBP05060 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
CHGBP05060 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CHGBP05060 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CHGBP05060 USP45-205ENST00000472914 1617 ntTSL 5 BASIC26.39■■□□□ 1.81
CHGBP05060 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC26.38■■□□□ 1.81
CHGBP05060 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CHGBP05060 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHGBP05060 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms