Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
APOC3P02656 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
APOC3P02656 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APOC3P02656 AC110285.7-201ENST00000624417 1536 ntBASIC17.7■□□□□ 0.42
APOC3P02656 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
APOC3P02656 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.7■□□□□ 0.42
APOC3P02656 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
APOC3P02656 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APOC3P02656 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APOC3P02656 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
APOC3P02656 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.69■□□□□ 0.42
APOC3P02656 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC17.69■□□□□ 0.42
APOC3P02656 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APOC3P02656 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APOC3P02656 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.69■□□□□ 0.42
APOC3P02656 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APOC3P02656 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APOC3P02656 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
APOC3P02656 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
APOC3P02656 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
APOC3P02656 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.69■□□□□ 0.42
APOC3P02656 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
APOC3P02656 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC17.69■□□□□ 0.42
APOC3P02656 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
APOC3P02656 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APOC3P02656 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
APOC3P02656 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
APOC3P02656 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
APOC3P02656 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APOC3P02656 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
APOC3P02656 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.69■□□□□ 0.42
APOC3P02656 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
APOC3P02656 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
APOC3P02656 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOC3P02656 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOC3P02656 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
APOC3P02656 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOC3P02656 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
APOC3P02656 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOC3P02656 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
APOC3P02656 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.68■□□□□ 0.42
APOC3P02656 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOC3P02656 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOC3P02656 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.68■□□□□ 0.42
APOC3P02656 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.68■□□□□ 0.42
APOC3P02656 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.68■□□□□ 0.42
APOC3P02656 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOC3P02656 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
APOC3P02656 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC17.67■□□□□ 0.42
APOC3P02656 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.67■□□□□ 0.42
APOC3P02656 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
APOC3P02656 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
APOC3P02656 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOC3P02656 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
APOC3P02656 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.67■□□□□ 0.42
APOC3P02656 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
APOC3P02656 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOC3P02656 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOC3P02656 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC17.67■□□□□ 0.42
APOC3P02656 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
APOC3P02656 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
APOC3P02656 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
APOC3P02656 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOC3P02656 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
APOC3P02656 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.67■□□□□ 0.42
APOC3P02656 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOC3P02656 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
APOC3P02656 EI24-212ENST00000615917 1407 ntTSL 2 BASIC17.66■□□□□ 0.42
APOC3P02656 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOC3P02656 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.66■□□□□ 0.42
APOC3P02656 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOC3P02656 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
APOC3P02656 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.66■□□□□ 0.42
APOC3P02656 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.66■□□□□ 0.42
APOC3P02656 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOC3P02656 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
APOC3P02656 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.66■□□□□ 0.42
APOC3P02656 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.65■□□□□ 0.42
APOC3P02656 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
APOC3P02656 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOC3P02656 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
APOC3P02656 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
APOC3P02656 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
APOC3P02656 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOC3P02656 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOC3P02656 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
APOC3P02656 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.65■□□□□ 0.42
APOC3P02656 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
APOC3P02656 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.42
APOC3P02656 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
APOC3P02656 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
APOC3P02656 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
APOC3P02656 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.64■□□□□ 0.41
APOC3P02656 AC006077.2-201ENST00000623591 457 ntBASIC17.64■□□□□ 0.41
APOC3P02656 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
APOC3P02656 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
APOC3P02656 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
APOC3P02656 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
APOC3P02656 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
APOC3P02656 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms