Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.44■□□□□ 0.54
HLA-AP01891 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.44■□□□□ 0.54
HLA-AP01891 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
HLA-AP01891 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.44■□□□□ 0.54
HLA-AP01891 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-AP01891 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-AP01891 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.44■□□□□ 0.54
HLA-AP01891 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-AP01891 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
HLA-AP01891 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-AP01891 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
HLA-AP01891 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.43■□□□□ 0.54
HLA-AP01891 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
HLA-AP01891 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.43■□□□□ 0.54
HLA-AP01891 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
HLA-AP01891 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-AP01891 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-AP01891 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-AP01891 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-AP01891 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-AP01891 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
HLA-AP01891 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-AP01891 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-AP01891 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-AP01891 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
HLA-AP01891 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
HLA-AP01891 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-AP01891 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.42■□□□□ 0.54
HLA-AP01891 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.42■□□□□ 0.54
HLA-AP01891 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
HLA-AP01891 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.42■□□□□ 0.54
HLA-AP01891 AC018755.3-202ENST00000596210 929 ntBASIC18.42■□□□□ 0.54
HLA-AP01891 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.42■□□□□ 0.54
HLA-AP01891 AC129492.7-201ENST00000622992 756 ntBASIC18.42■□□□□ 0.54
HLA-AP01891 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-AP01891 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-AP01891 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-AP01891 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-AP01891 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-AP01891 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
HLA-AP01891 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.41■□□□□ 0.54
HLA-AP01891 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
HLA-AP01891 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.41■□□□□ 0.54
HLA-AP01891 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-AP01891 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-AP01891 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HLA-AP01891 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HLA-AP01891 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-AP01891 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-AP01891 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
HLA-AP01891 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
HLA-AP01891 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-AP01891 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-AP01891 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-AP01891 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.4■□□□□ 0.54
HLA-AP01891 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-AP01891 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.4■□□□□ 0.54
HLA-AP01891 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-AP01891 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-AP01891 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-AP01891 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-AP01891 RPS2P7-201ENST00000447334 885 ntBASIC18.4■□□□□ 0.54
HLA-AP01891 DUX4L18-201ENST00000553347 1267 ntBASIC18.4■□□□□ 0.54
HLA-AP01891 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HLA-AP01891 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
HLA-AP01891 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.4■□□□□ 0.54
HLA-AP01891 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-AP01891 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-AP01891 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-AP01891 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-AP01891 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-AP01891 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HLA-AP01891 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
HLA-AP01891 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HLA-AP01891 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-AP01891 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-AP01891 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-AP01891 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.39■□□□□ 0.53
HLA-AP01891 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.39■□□□□ 0.53
HLA-AP01891 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
HLA-AP01891 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
HLA-AP01891 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-AP01891 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-AP01891 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-AP01891 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-AP01891 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-AP01891 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
HLA-AP01891 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-AP01891 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-AP01891 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
HLA-AP01891 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.38■□□□□ 0.53
HLA-AP01891 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-AP01891 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-AP01891 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.38■□□□□ 0.53
HLA-AP01891 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-AP01891 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.38■□□□□ 0.53
HLA-AP01891 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.38■□□□□ 0.53
HLA-AP01891 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.38■□□□□ 0.53
HLA-AP01891 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-AP01891 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms