Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.49■□□□□ 0.71
CDRT1O95170 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CDRT1O95170 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CDRT1O95170 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDRT1O95170 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDRT1O95170 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDRT1O95170 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDRT1O95170 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDRT1O95170 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDRT1O95170 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDRT1O95170 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.47■□□□□ 0.71
CDRT1O95170 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.47■□□□□ 0.71
CDRT1O95170 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDRT1O95170 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDRT1O95170 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDRT1O95170 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.47■□□□□ 0.71
CDRT1O95170 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDRT1O95170 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.47■□□□□ 0.71
CDRT1O95170 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDRT1O95170 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.47■□□□□ 0.71
CDRT1O95170 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDRT1O95170 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDRT1O95170 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDRT1O95170 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.47■□□□□ 0.71
CDRT1O95170 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDRT1O95170 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDRT1O95170 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDRT1O95170 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDRT1O95170 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDRT1O95170 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDRT1O95170 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CDRT1O95170 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDRT1O95170 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CDRT1O95170 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDRT1O95170 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CDRT1O95170 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDRT1O95170 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDRT1O95170 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDRT1O95170 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDRT1O95170 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.46■□□□□ 0.71
CDRT1O95170 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDRT1O95170 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CDRT1O95170 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDRT1O95170 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDRT1O95170 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDRT1O95170 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.45■□□□□ 0.7
CDRT1O95170 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDRT1O95170 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDRT1O95170 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDRT1O95170 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.45■□□□□ 0.7
CDRT1O95170 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.45■□□□□ 0.7
CDRT1O95170 AC011551.1-201ENST00000614101 683 ntBASIC19.45■□□□□ 0.7
CDRT1O95170 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDRT1O95170 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDRT1O95170 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDRT1O95170 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDRT1O95170 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDRT1O95170 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDRT1O95170 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDRT1O95170 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.44■□□□□ 0.7
CDRT1O95170 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDRT1O95170 DUX4L18-201ENST00000553347 1267 ntBASIC19.44■□□□□ 0.7
CDRT1O95170 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDRT1O95170 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDRT1O95170 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDRT1O95170 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDRT1O95170 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CDRT1O95170 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDRT1O95170 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDRT1O95170 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDRT1O95170 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDRT1O95170 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDRT1O95170 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDRT1O95170 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CDRT1O95170 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDRT1O95170 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDRT1O95170 AC092667.1-201ENST00000434301 2586 ntBASIC19.42■□□□□ 0.7
CDRT1O95170 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CDRT1O95170 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDRT1O95170 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CDRT1O95170 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
CDRT1O95170 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDRT1O95170 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDRT1O95170 AC139795.1-202ENST00000500444 432 ntBASIC19.42■□□□□ 0.7
CDRT1O95170 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDRT1O95170 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.42■□□□□ 0.7
CDRT1O95170 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDRT1O95170 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.42■□□□□ 0.7
CDRT1O95170 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDRT1O95170 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDRT1O95170 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDRT1O95170 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.42■□□□□ 0.7
CDRT1O95170 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDRT1O95170 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CDRT1O95170 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
CDRT1O95170 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDRT1O95170 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDRT1O95170 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.41■□□□□ 0.7
CDRT1O95170 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.41■□□□□ 0.7
CDRT1O95170 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms