Protein–RNA interactions for Protein: O95167

NDUFA3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3O95167 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
NDUFA3O95167 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFA3O95167 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFA3O95167 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
NDUFA3O95167 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFA3O95167 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFA3O95167 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NDUFA3O95167 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.49■□□□□ 0.39
NDUFA3O95167 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
NDUFA3O95167 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.49■□□□□ 0.39
NDUFA3O95167 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFA3O95167 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFA3O95167 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFA3O95167 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFA3O95167 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.49■□□□□ 0.39
NDUFA3O95167 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.49■□□□□ 0.39
NDUFA3O95167 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.49■□□□□ 0.39
NDUFA3O95167 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFA3O95167 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
NDUFA3O95167 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NDUFA3O95167 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFA3O95167 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFA3O95167 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
NDUFA3O95167 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NDUFA3O95167 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFA3O95167 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
NDUFA3O95167 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFA3O95167 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFA3O95167 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFA3O95167 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFA3O95167 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
NDUFA3O95167 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.48■□□□□ 0.39
NDUFA3O95167 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFA3O95167 CA15P2-201ENST00000611168 834 ntBASIC17.48■□□□□ 0.39
NDUFA3O95167 AC068587.7-201ENST00000641602 218 ntBASIC17.48■□□□□ 0.39
NDUFA3O95167 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFA3O95167 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFA3O95167 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFA3O95167 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFA3O95167 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFA3O95167 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFA3O95167 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFA3O95167 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFA3O95167 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NDUFA3O95167 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.47■□□□□ 0.39
NDUFA3O95167 AL136162.1-201ENST00000607711 1078 ntBASIC17.47■□□□□ 0.39
NDUFA3O95167 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFA3O95167 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFA3O95167 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFA3O95167 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
NDUFA3O95167 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFA3O95167 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFA3O95167 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.46■□□□□ 0.39
NDUFA3O95167 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFA3O95167 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.46■□□□□ 0.39
NDUFA3O95167 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFA3O95167 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFA3O95167 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.46■□□□□ 0.39
NDUFA3O95167 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFA3O95167 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.46■□□□□ 0.39
NDUFA3O95167 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.46■□□□□ 0.39
NDUFA3O95167 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.46■□□□□ 0.39
NDUFA3O95167 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFA3O95167 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFA3O95167 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFA3O95167 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFA3O95167 AC135279.3-201ENST00000610945 1311 ntBASIC17.46■□□□□ 0.38
NDUFA3O95167 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
NDUFA3O95167 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFA3O95167 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFA3O95167 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NDUFA3O95167 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFA3O95167 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFA3O95167 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NDUFA3O95167 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFA3O95167 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
NDUFA3O95167 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.45■□□□□ 0.38
NDUFA3O95167 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFA3O95167 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFA3O95167 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.45■□□□□ 0.38
NDUFA3O95167 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.45■□□□□ 0.38
NDUFA3O95167 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFA3O95167 AC096631.2-201ENST00000436136 790 ntBASIC17.45■□□□□ 0.38
NDUFA3O95167 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.45■□□□□ 0.38
NDUFA3O95167 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.45■□□□□ 0.38
NDUFA3O95167 AC024257.2-201ENST00000549699 147 ntBASIC17.45■□□□□ 0.38
NDUFA3O95167 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.45■□□□□ 0.38
NDUFA3O95167 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFA3O95167 GUSBP5-202ENST00000510805 1989 ntBASIC17.45■□□□□ 0.38
NDUFA3O95167 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.45■□□□□ 0.38
NDUFA3O95167 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFA3O95167 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NDUFA3O95167 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFA3O95167 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFA3O95167 AL117328.2-201ENST00000624617 1940 ntBASIC17.45■□□□□ 0.38
NDUFA3O95167 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDUFA3O95167 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDUFA3O95167 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDUFA3O95167 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDUFA3O95167 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms