Protein–RNA interactions for Protein: O75438

NDUFB1, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1, humanhuman

Predictions only

Length 58 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB1O75438 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NDUFB1O75438 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
NDUFB1O75438 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
NDUFB1O75438 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
NDUFB1O75438 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC13.02□□□□□ -0.32
NDUFB1O75438 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
NDUFB1O75438 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFB1O75438 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFB1O75438 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFB1O75438 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFB1O75438 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC13.02□□□□□ -0.33
NDUFB1O75438 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFB1O75438 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFB1O75438 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC13.02□□□□□ -0.33
NDUFB1O75438 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFB1O75438 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC13.02□□□□□ -0.33
NDUFB1O75438 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC13.02□□□□□ -0.33
NDUFB1O75438 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFB1O75438 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC13.02□□□□□ -0.33
NDUFB1O75438 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFB1O75438 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFB1O75438 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFB1O75438 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFB1O75438 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFB1O75438 BID-212ENST00000614949 1988 ntTSL 5 BASIC13.01□□□□□ -0.33
NDUFB1O75438 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC13.01□□□□□ -0.33
NDUFB1O75438 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
NDUFB1O75438 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC13.01□□□□□ -0.33
NDUFB1O75438 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
NDUFB1O75438 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFB1O75438 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFB1O75438 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFB1O75438 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFB1O75438 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFB1O75438 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFB1O75438 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC13.01□□□□□ -0.33
NDUFB1O75438 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC13.01□□□□□ -0.33
NDUFB1O75438 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC13.01□□□□□ -0.33
NDUFB1O75438 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC13.01□□□□□ -0.33
NDUFB1O75438 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFB1O75438 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFB1O75438 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFB1O75438 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFB1O75438 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC13.01□□□□□ -0.33
NDUFB1O75438 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFB1O75438 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
NDUFB1O75438 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFB1O75438 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFB1O75438 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFB1O75438 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
NDUFB1O75438 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC13.01□□□□□ -0.33
NDUFB1O75438 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFB1O75438 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC13.01□□□□□ -0.33
NDUFB1O75438 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC13.01□□□□□ -0.33
NDUFB1O75438 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFB1O75438 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFB1O75438 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFB1O75438 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NDUFB1O75438 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13□□□□□ -0.33
NDUFB1O75438 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC13□□□□□ -0.33
NDUFB1O75438 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC13□□□□□ -0.33
NDUFB1O75438 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFB1O75438 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFB1O75438 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFB1O75438 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFB1O75438 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC13□□□□□ -0.33
NDUFB1O75438 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC13□□□□□ -0.33
NDUFB1O75438 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC13□□□□□ -0.33
NDUFB1O75438 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC13□□□□□ -0.33
NDUFB1O75438 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFB1O75438 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFB1O75438 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
NDUFB1O75438 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFB1O75438 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFB1O75438 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC13□□□□□ -0.33
NDUFB1O75438 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC13□□□□□ -0.33
NDUFB1O75438 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFB1O75438 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFB1O75438 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFB1O75438 AGPS-202ENST00000409888 815 ntTSL 4 BASIC13□□□□□ -0.33
NDUFB1O75438 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFB1O75438 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC13□□□□□ -0.33
NDUFB1O75438 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC13□□□□□ -0.33
NDUFB1O75438 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC13□□□□□ -0.33
NDUFB1O75438 NRG1-221ENST00000614767 762 ntTSL 5 BASIC13□□□□□ -0.33
NDUFB1O75438 HGH1-207ENST00000628266 258 ntTSL 5 BASIC13□□□□□ -0.33
NDUFB1O75438 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFB1O75438 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFB1O75438 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC13□□□□□ -0.33
NDUFB1O75438 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFB1O75438 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC13□□□□□ -0.33
NDUFB1O75438 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFB1O75438 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC13□□□□□ -0.33
NDUFB1O75438 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFB1O75438 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFB1O75438 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFB1O75438 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFB1O75438 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
NDUFB1O75438 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
NDUFB1O75438 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms