Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 DUX4L21-201ENST00000622058 1269 ntBASIC18.65■□□□□ 0.58
SSNA1O43805 DUX4L10-201ENST00000622460 1267 ntBASIC18.65■□□□□ 0.58
SSNA1O43805 DUX4L25-201ENST00000624915 1269 ntBASIC18.65■□□□□ 0.58
SSNA1O43805 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.65■□□□□ 0.58
SSNA1O43805 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSNA1O43805 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSNA1O43805 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSNA1O43805 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSNA1O43805 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSNA1O43805 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSNA1O43805 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSNA1O43805 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.64■□□□□ 0.58
SSNA1O43805 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.64■□□□□ 0.58
SSNA1O43805 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
SSNA1O43805 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SSNA1O43805 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSNA1O43805 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SSNA1O43805 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSNA1O43805 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSNA1O43805 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.64■□□□□ 0.57
SSNA1O43805 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSNA1O43805 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSNA1O43805 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSNA1O43805 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.64■□□□□ 0.57
SSNA1O43805 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSNA1O43805 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.63■□□□□ 0.57
SSNA1O43805 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SSNA1O43805 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.63■□□□□ 0.57
SSNA1O43805 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.63■□□□□ 0.57
SSNA1O43805 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSNA1O43805 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSNA1O43805 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SSNA1O43805 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
SSNA1O43805 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SSNA1O43805 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
SSNA1O43805 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSNA1O43805 AC007952.6-201ENST00000573168 2673 ntBASIC18.62■□□□□ 0.57
SSNA1O43805 AC003957.1-201ENST00000625108 2673 ntBASIC18.62■□□□□ 0.57
SSNA1O43805 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSNA1O43805 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC18.62■□□□□ 0.57
SSNA1O43805 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSNA1O43805 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.62■□□□□ 0.57
SSNA1O43805 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.62■□□□□ 0.57
SSNA1O43805 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
SSNA1O43805 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSNA1O43805 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SSNA1O43805 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SSNA1O43805 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSNA1O43805 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSNA1O43805 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SSNA1O43805 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSNA1O43805 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SSNA1O43805 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SSNA1O43805 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
SSNA1O43805 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.61■□□□□ 0.57
SSNA1O43805 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSNA1O43805 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSNA1O43805 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSNA1O43805 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSNA1O43805 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
SSNA1O43805 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
SSNA1O43805 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SSNA1O43805 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSNA1O43805 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.6■□□□□ 0.57
SSNA1O43805 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSNA1O43805 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSNA1O43805 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSNA1O43805 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSNA1O43805 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSNA1O43805 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSNA1O43805 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SSNA1O43805 AP006261.1-201ENST00000584783 668 ntBASIC18.6■□□□□ 0.57
SSNA1O43805 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSNA1O43805 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SSNA1O43805 AL391422.3-201ENST00000603791 2761 ntBASIC18.6■□□□□ 0.57
SSNA1O43805 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSNA1O43805 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSNA1O43805 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSNA1O43805 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.6■□□□□ 0.57
SSNA1O43805 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
SSNA1O43805 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSNA1O43805 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSNA1O43805 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SSNA1O43805 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSNA1O43805 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSNA1O43805 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.59■□□□□ 0.57
SSNA1O43805 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSNA1O43805 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SSNA1O43805 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SSNA1O43805 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SSNA1O43805 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
SSNA1O43805 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSNA1O43805 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SSNA1O43805 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSNA1O43805 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSNA1O43805 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SSNA1O43805 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SSNA1O43805 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SSNA1O43805 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.58■□□□□ 0.57
SSNA1O43805 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms