Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.15■□□□□ 0.82
ARHGEF9O43307 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.15■□□□□ 0.82
ARHGEF9O43307 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.15■□□□□ 0.82
ARHGEF9O43307 AC133561.4-201ENST00000566112 224 ntBASIC20.15■□□□□ 0.82
ARHGEF9O43307 SNX5-217ENST00000606557 1087 ntBASIC20.15■□□□□ 0.82
ARHGEF9O43307 AC110285.6-201ENST00000617652 491 ntBASIC20.15■□□□□ 0.82
ARHGEF9O43307 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
ARHGEF9O43307 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
ARHGEF9O43307 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ARHGEF9O43307 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ARHGEF9O43307 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
ARHGEF9O43307 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
ARHGEF9O43307 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ARHGEF9O43307 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ARHGEF9O43307 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.14■□□□□ 0.81
ARHGEF9O43307 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ARHGEF9O43307 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ARHGEF9O43307 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.14■□□□□ 0.81
ARHGEF9O43307 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.14■□□□□ 0.81
ARHGEF9O43307 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
ARHGEF9O43307 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.14■□□□□ 0.81
ARHGEF9O43307 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.14■□□□□ 0.81
ARHGEF9O43307 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ARHGEF9O43307 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ARHGEF9O43307 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ARHGEF9O43307 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.13■□□□□ 0.81
ARHGEF9O43307 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.13■□□□□ 0.81
ARHGEF9O43307 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.13■□□□□ 0.81
ARHGEF9O43307 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.13■□□□□ 0.81
ARHGEF9O43307 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ARHGEF9O43307 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ARHGEF9O43307 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.13■□□□□ 0.81
ARHGEF9O43307 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ARHGEF9O43307 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ARHGEF9O43307 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ARHGEF9O43307 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ARHGEF9O43307 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
ARHGEF9O43307 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
ARHGEF9O43307 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.12■□□□□ 0.81
ARHGEF9O43307 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
ARHGEF9O43307 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ARHGEF9O43307 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ARHGEF9O43307 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.12■□□□□ 0.81
ARHGEF9O43307 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.12■□□□□ 0.81
ARHGEF9O43307 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.12■□□□□ 0.81
ARHGEF9O43307 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ARHGEF9O43307 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ARHGEF9O43307 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ARHGEF9O43307 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
ARHGEF9O43307 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.12■□□□□ 0.81
ARHGEF9O43307 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ARHGEF9O43307 AC079630.1-202ENST00000618127 1840 ntBASIC20.11■□□□□ 0.81
ARHGEF9O43307 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ARHGEF9O43307 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.11■□□□□ 0.81
ARHGEF9O43307 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.11■□□□□ 0.81
ARHGEF9O43307 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ARHGEF9O43307 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
ARHGEF9O43307 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ARHGEF9O43307 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.11■□□□□ 0.81
ARHGEF9O43307 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.11■□□□□ 0.81
ARHGEF9O43307 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.11■□□□□ 0.81
ARHGEF9O43307 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
ARHGEF9O43307 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.11■□□□□ 0.81
ARHGEF9O43307 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ARHGEF9O43307 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ARHGEF9O43307 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ARHGEF9O43307 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.11■□□□□ 0.81
ARHGEF9O43307 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ARHGEF9O43307 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
ARHGEF9O43307 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
ARHGEF9O43307 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
ARHGEF9O43307 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ARHGEF9O43307 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ARHGEF9O43307 EP400NL-214ENST00000641289 2402 ntBASIC20.1■□□□□ 0.81
ARHGEF9O43307 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ARHGEF9O43307 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.1■□□□□ 0.81
ARHGEF9O43307 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ARHGEF9O43307 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
ARHGEF9O43307 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ARHGEF9O43307 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.1■□□□□ 0.81
ARHGEF9O43307 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.1■□□□□ 0.81
ARHGEF9O43307 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
ARHGEF9O43307 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ARHGEF9O43307 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.1■□□□□ 0.81
ARHGEF9O43307 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
ARHGEF9O43307 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ARHGEF9O43307 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.09■□□□□ 0.81
ARHGEF9O43307 AC138932.1-201ENST00000534164 6830 ntBASIC20.09■□□□□ 0.81
ARHGEF9O43307 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.09■□□□□ 0.81
ARHGEF9O43307 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ARHGEF9O43307 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
ARHGEF9O43307 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ARHGEF9O43307 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.09■□□□□ 0.81
ARHGEF9O43307 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ARHGEF9O43307 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.09■□□□□ 0.81
ARHGEF9O43307 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.09■□□□□ 0.81
ARHGEF9O43307 AL121603.2-201ENST00000557373 2117 ntBASIC20.09■□□□□ 0.81
ARHGEF9O43307 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
ARHGEF9O43307 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.09■□□□□ 0.81
ARHGEF9O43307 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms