Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.26■■□□□ 1.79
FOXN1O15353 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC26.26■■□□□ 1.79
FOXN1O15353 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
FOXN1O15353 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
FOXN1O15353 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC26.25■■□□□ 1.79
FOXN1O15353 CASK-201ENST00000378154 2494 ntTSL 5 BASIC26.25■■□□□ 1.79
FOXN1O15353 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
FOXN1O15353 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
FOXN1O15353 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC26.25■■□□□ 1.79
FOXN1O15353 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
FOXN1O15353 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
FOXN1O15353 SLC7A5P2-201ENST00000553010 536 ntBASIC26.25■■□□□ 1.79
FOXN1O15353 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC26.25■■□□□ 1.79
FOXN1O15353 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC26.25■■□□□ 1.79
FOXN1O15353 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
FOXN1O15353 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
FOXN1O15353 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC26.25■■□□□ 1.79
FOXN1O15353 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC26.24■■□□□ 1.79
FOXN1O15353 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.24■■□□□ 1.79
FOXN1O15353 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
FOXN1O15353 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC26.24■■□□□ 1.79
FOXN1O15353 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC26.24■■□□□ 1.79
FOXN1O15353 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
FOXN1O15353 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC26.23■■□□□ 1.79
FOXN1O15353 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
FOXN1O15353 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
FOXN1O15353 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
FOXN1O15353 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
FOXN1O15353 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC26.23■■□□□ 1.79
FOXN1O15353 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC26.22■■□□□ 1.79
FOXN1O15353 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC26.22■■□□□ 1.79
FOXN1O15353 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
FOXN1O15353 MIR1224-201ENST00000408193 85 ntBASIC26.22■■□□□ 1.79
FOXN1O15353 SPI1-203ENST00000533030 661 ntTSL 2 BASIC26.22■■□□□ 1.79
FOXN1O15353 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
FOXN1O15353 ABCB10P4-201ENST00000566803 2184 ntBASIC26.22■■□□□ 1.79
FOXN1O15353 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
FOXN1O15353 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
FOXN1O15353 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
FOXN1O15353 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
FOXN1O15353 AC131274.2-201ENST00000580697 1507 ntBASIC26.21■■□□□ 1.79
FOXN1O15353 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
FOXN1O15353 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
FOXN1O15353 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
FOXN1O15353 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC26.21■■□□□ 1.79
FOXN1O15353 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
FOXN1O15353 DUX4L4-201ENST00000566884 1269 ntBASIC26.21■■□□□ 1.79
FOXN1O15353 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
FOXN1O15353 AP006294.2-201ENST00000641667 209 ntBASIC26.21■■□□□ 1.79
FOXN1O15353 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
FOXN1O15353 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC26.21■■□□□ 1.79
FOXN1O15353 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC26.21■■□□□ 1.79
FOXN1O15353 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC26.21■■□□□ 1.79
FOXN1O15353 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
FOXN1O15353 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
FOXN1O15353 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.2■■□□□ 1.79
FOXN1O15353 AC141586.4-201ENST00000624558 1573 ntBASIC26.2■■□□□ 1.79
FOXN1O15353 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
FOXN1O15353 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
FOXN1O15353 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
FOXN1O15353 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC26.2■■□□□ 1.78
FOXN1O15353 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
FOXN1O15353 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC26.2■■□□□ 1.78
FOXN1O15353 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.2■■□□□ 1.78
FOXN1O15353 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
FOXN1O15353 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.19■■□□□ 1.78
FOXN1O15353 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
FOXN1O15353 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
FOXN1O15353 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
FOXN1O15353 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC26.19■■□□□ 1.78
FOXN1O15353 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
FOXN1O15353 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
FOXN1O15353 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
FOXN1O15353 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
FOXN1O15353 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
FOXN1O15353 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC26.18■■□□□ 1.78
FOXN1O15353 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
FOXN1O15353 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
FOXN1O15353 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
FOXN1O15353 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC26.18■■□□□ 1.78
FOXN1O15353 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
FOXN1O15353 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
FOXN1O15353 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC26.18■■□□□ 1.78
FOXN1O15353 METTL15-202ENST00000403099 795 ntTSL 5 BASIC26.18■■□□□ 1.78
FOXN1O15353 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC26.18■■□□□ 1.78
FOXN1O15353 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC26.18■■□□□ 1.78
FOXN1O15353 PFKL-212ENST00000628044 129 ntTSL 3 BASIC26.18■■□□□ 1.78
FOXN1O15353 AC105233.4-201ENST00000642045 216 ntBASIC26.18■■□□□ 1.78
FOXN1O15353 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26.18■■□□□ 1.78
FOXN1O15353 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
FOXN1O15353 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
FOXN1O15353 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
FOXN1O15353 KRT19P1-201ENST00000405746 1186 ntBASIC26.17■■□□□ 1.78
FOXN1O15353 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC26.17■■□□□ 1.78
FOXN1O15353 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
FOXN1O15353 CASP6-205ENST00000505486 538 ntTSL 4 BASIC26.17■■□□□ 1.78
FOXN1O15353 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC26.17■■□□□ 1.78
FOXN1O15353 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
FOXN1O15353 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
FOXN1O15353 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms