Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.02■□□□□ 0.96
NTN3O00634 AL139125.2-201ENST00000623134 1869 ntBASIC21.02■□□□□ 0.96
NTN3O00634 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NTN3O00634 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NTN3O00634 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.02■□□□□ 0.95
NTN3O00634 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NTN3O00634 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.01■□□□□ 0.95
NTN3O00634 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.01■□□□□ 0.95
NTN3O00634 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
NTN3O00634 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NTN3O00634 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.01■□□□□ 0.95
NTN3O00634 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.01■□□□□ 0.95
NTN3O00634 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.01■□□□□ 0.95
NTN3O00634 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NTN3O00634 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NTN3O00634 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NTN3O00634 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21■□□□□ 0.95
NTN3O00634 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21■□□□□ 0.95
NTN3O00634 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NTN3O00634 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
NTN3O00634 AC026185.1-201ENST00000445748 174 ntBASIC21■□□□□ 0.95
NTN3O00634 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21■□□□□ 0.95
NTN3O00634 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21■□□□□ 0.95
NTN3O00634 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21■□□□□ 0.95
NTN3O00634 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NTN3O00634 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NTN3O00634 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NTN3O00634 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NTN3O00634 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.99■□□□□ 0.95
NTN3O00634 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.99■□□□□ 0.95
NTN3O00634 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
NTN3O00634 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NTN3O00634 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.99■□□□□ 0.95
NTN3O00634 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NTN3O00634 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NTN3O00634 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
NTN3O00634 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NTN3O00634 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NTN3O00634 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.98■□□□□ 0.95
NTN3O00634 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.98■□□□□ 0.95
NTN3O00634 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NTN3O00634 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.98■□□□□ 0.95
NTN3O00634 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NTN3O00634 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NTN3O00634 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NTN3O00634 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NTN3O00634 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NTN3O00634 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
NTN3O00634 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
NTN3O00634 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NTN3O00634 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.97■□□□□ 0.95
NTN3O00634 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
NTN3O00634 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.97■□□□□ 0.95
NTN3O00634 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.97■□□□□ 0.95
NTN3O00634 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
NTN3O00634 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.97■□□□□ 0.95
NTN3O00634 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NTN3O00634 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.97■□□□□ 0.95
NTN3O00634 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NTN3O00634 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NTN3O00634 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NTN3O00634 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.96■□□□□ 0.95
NTN3O00634 KRT18P11-201ENST00000435214 1283 ntBASIC20.96■□□□□ 0.95
NTN3O00634 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NTN3O00634 AC079140.4-201ENST00000507448 529 ntBASIC20.96■□□□□ 0.95
NTN3O00634 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.96■□□□□ 0.95
NTN3O00634 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
NTN3O00634 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.96■□□□□ 0.95
NTN3O00634 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NTN3O00634 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.95■□□□□ 0.94
NTN3O00634 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NTN3O00634 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NTN3O00634 ABCB10P4-201ENST00000566803 2184 ntBASIC20.95■□□□□ 0.94
NTN3O00634 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.95■□□□□ 0.94
NTN3O00634 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NTN3O00634 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.95■□□□□ 0.94
NTN3O00634 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NTN3O00634 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.95■□□□□ 0.94
NTN3O00634 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.95■□□□□ 0.94
NTN3O00634 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NTN3O00634 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NTN3O00634 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NTN3O00634 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NTN3O00634 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NTN3O00634 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.95■□□□□ 0.94
NTN3O00634 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
NTN3O00634 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NTN3O00634 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.94■□□□□ 0.94
NTN3O00634 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NTN3O00634 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.94■□□□□ 0.94
NTN3O00634 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.94■□□□□ 0.94
NTN3O00634 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
NTN3O00634 DUSP8P3-201ENST00000399571 1760 ntBASIC20.94■□□□□ 0.94
NTN3O00634 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NTN3O00634 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.94■□□□□ 0.94
NTN3O00634 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NTN3O00634 ESRRAP2-201ENST00000418437 1549 ntBASIC20.94■□□□□ 0.94
NTN3O00634 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
NTN3O00634 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NTN3O00634 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms