Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.36■□□□□ 0.85
KPNA4O00629 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.36■□□□□ 0.85
KPNA4O00629 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
KPNA4O00629 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
KPNA4O00629 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
KPNA4O00629 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
KPNA4O00629 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
KPNA4O00629 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KPNA4O00629 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.36■□□□□ 0.85
KPNA4O00629 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KPNA4O00629 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.35■□□□□ 0.85
KPNA4O00629 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
KPNA4O00629 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
KPNA4O00629 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KPNA4O00629 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KPNA4O00629 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.35■□□□□ 0.85
KPNA4O00629 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.35■□□□□ 0.85
KPNA4O00629 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KPNA4O00629 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KPNA4O00629 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.35■□□□□ 0.85
KPNA4O00629 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.35■□□□□ 0.85
KPNA4O00629 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KPNA4O00629 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KPNA4O00629 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.35■□□□□ 0.85
KPNA4O00629 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KPNA4O00629 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KPNA4O00629 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KPNA4O00629 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.35■□□□□ 0.85
KPNA4O00629 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KPNA4O00629 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
KPNA4O00629 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
KPNA4O00629 AC021242.3-201ENST00000607598 1377 ntBASIC20.34■□□□□ 0.85
KPNA4O00629 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
KPNA4O00629 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.34■□□□□ 0.85
KPNA4O00629 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KPNA4O00629 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
KPNA4O00629 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
KPNA4O00629 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
KPNA4O00629 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KPNA4O00629 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
KPNA4O00629 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KPNA4O00629 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KPNA4O00629 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
KPNA4O00629 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KPNA4O00629 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
KPNA4O00629 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.33■□□□□ 0.85
KPNA4O00629 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
KPNA4O00629 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
KPNA4O00629 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
KPNA4O00629 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
KPNA4O00629 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
KPNA4O00629 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.32■□□□□ 0.84
KPNA4O00629 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
KPNA4O00629 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
KPNA4O00629 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.32■□□□□ 0.84
KPNA4O00629 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KPNA4O00629 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
KPNA4O00629 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KPNA4O00629 RARRES2P1-201ENST00000474487 481 ntBASIC20.32■□□□□ 0.84
KPNA4O00629 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KPNA4O00629 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
KPNA4O00629 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KPNA4O00629 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
KPNA4O00629 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KPNA4O00629 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KPNA4O00629 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KPNA4O00629 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
KPNA4O00629 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KPNA4O00629 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
KPNA4O00629 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KPNA4O00629 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.31■□□□□ 0.84
KPNA4O00629 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KPNA4O00629 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KPNA4O00629 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KPNA4O00629 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
KPNA4O00629 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KPNA4O00629 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KPNA4O00629 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KPNA4O00629 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.31■□□□□ 0.84
KPNA4O00629 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KPNA4O00629 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.31■□□□□ 0.84
KPNA4O00629 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KPNA4O00629 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KPNA4O00629 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
KPNA4O00629 AC005703.6-201ENST00000623265 1329 ntBASIC20.3■□□□□ 0.84
KPNA4O00629 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.3■□□□□ 0.84
KPNA4O00629 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KPNA4O00629 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KPNA4O00629 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KPNA4O00629 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
KPNA4O00629 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.3■□□□□ 0.84
KPNA4O00629 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
KPNA4O00629 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
KPNA4O00629 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
KPNA4O00629 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KPNA4O00629 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.3■□□□□ 0.84
KPNA4O00629 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KPNA4O00629 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KPNA4O00629 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KPNA4O00629 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms