Protein–RNA interactions for Protein: O00507

USP9Y, Probable ubiquitin carboxyl-terminal hydrolase FAF-Y, humanhuman

Predicted RBP Predictions only

Length 2,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9YO00507 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
USP9YO00507 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP9YO00507 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
USP9YO00507 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.23■□□□□ 0.67
USP9YO00507 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.23■□□□□ 0.67
USP9YO00507 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP9YO00507 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP9YO00507 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.23■□□□□ 0.67
USP9YO00507 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.23■□□□□ 0.67
USP9YO00507 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP9YO00507 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.22■□□□□ 0.67
USP9YO00507 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.22■□□□□ 0.67
USP9YO00507 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
USP9YO00507 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP9YO00507 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.22■□□□□ 0.67
USP9YO00507 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP9YO00507 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.22■□□□□ 0.67
USP9YO00507 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
USP9YO00507 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.22■□□□□ 0.67
USP9YO00507 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP9YO00507 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
USP9YO00507 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP9YO00507 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.21■□□□□ 0.67
USP9YO00507 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.21■□□□□ 0.67
USP9YO00507 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.21■□□□□ 0.67
USP9YO00507 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.21■□□□□ 0.67
USP9YO00507 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP9YO00507 MKRN4P-201ENST00000444706 1521 ntBASIC19.21■□□□□ 0.67
USP9YO00507 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.21■□□□□ 0.67
USP9YO00507 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.21■□□□□ 0.67
USP9YO00507 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
USP9YO00507 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.21■□□□□ 0.67
USP9YO00507 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
USP9YO00507 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.21■□□□□ 0.67
USP9YO00507 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.21■□□□□ 0.67
USP9YO00507 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP9YO00507 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.21■□□□□ 0.67
USP9YO00507 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.21■□□□□ 0.67
USP9YO00507 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP9YO00507 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.2■□□□□ 0.66
USP9YO00507 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.2■□□□□ 0.66
USP9YO00507 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP9YO00507 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP9YO00507 MIR6089-201ENST00000616698 64 ntBASIC19.2■□□□□ 0.66
USP9YO00507 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP9YO00507 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP9YO00507 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP9YO00507 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP9YO00507 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
USP9YO00507 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP9YO00507 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
USP9YO00507 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.19■□□□□ 0.66
USP9YO00507 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP9YO00507 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
USP9YO00507 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP9YO00507 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP9YO00507 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP9YO00507 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP9YO00507 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP9YO00507 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP9YO00507 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.19■□□□□ 0.66
USP9YO00507 ALDH1A3-203ENST00000557963 1670 ntBASIC19.19■□□□□ 0.66
USP9YO00507 FP325331.1-202ENST00000623531 1380 ntBASIC19.19■□□□□ 0.66
USP9YO00507 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP9YO00507 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP9YO00507 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
USP9YO00507 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.19■□□□□ 0.66
USP9YO00507 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP9YO00507 MYC-209ENST00000641252 345 ntBASIC19.19■□□□□ 0.66
USP9YO00507 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
USP9YO00507 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP9YO00507 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.19■□□□□ 0.66
USP9YO00507 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP9YO00507 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP9YO00507 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP9YO00507 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP9YO00507 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP9YO00507 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.18■□□□□ 0.66
USP9YO00507 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.18■□□□□ 0.66
USP9YO00507 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.18■□□□□ 0.66
USP9YO00507 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
USP9YO00507 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.18■□□□□ 0.66
USP9YO00507 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.18■□□□□ 0.66
USP9YO00507 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP9YO00507 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.18■□□□□ 0.66
USP9YO00507 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP9YO00507 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP9YO00507 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP9YO00507 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP9YO00507 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP9YO00507 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP9YO00507 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
USP9YO00507 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
USP9YO00507 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP9YO00507 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP9YO00507 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP9YO00507 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP9YO00507 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.17■□□□□ 0.66
USP9YO00507 AC010536.3-201ENST00000620306 533 ntBASIC19.17■□□□□ 0.66
USP9YO00507 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms