Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.08
CFAP99D6REC4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CFAP99D6REC4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP99D6REC4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
CFAP99D6REC4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP99D6REC4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP99D6REC4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.78■■□□□ 1.08
CFAP99D6REC4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP99D6REC4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CFAP99D6REC4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP99D6REC4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP99D6REC4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP99D6REC4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP99D6REC4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP99D6REC4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP99D6REC4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.78■■□□□ 1.08
CFAP99D6REC4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP99D6REC4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CFAP99D6REC4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CFAP99D6REC4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CFAP99D6REC4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.77■■□□□ 1.08
CFAP99D6REC4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CFAP99D6REC4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.77■■□□□ 1.08
CFAP99D6REC4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.77■■□□□ 1.08
CFAP99D6REC4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.77■■□□□ 1.08
CFAP99D6REC4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CFAP99D6REC4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.77■■□□□ 1.08
CFAP99D6REC4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.77■■□□□ 1.08
CFAP99D6REC4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CFAP99D6REC4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CFAP99D6REC4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CFAP99D6REC4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.77■■□□□ 1.08
CFAP99D6REC4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.07
CFAP99D6REC4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CFAP99D6REC4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CFAP99D6REC4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
CFAP99D6REC4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
CFAP99D6REC4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CFAP99D6REC4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.75■■□□□ 1.07
CFAP99D6REC4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CFAP99D6REC4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP99D6REC4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP99D6REC4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP99D6REC4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP99D6REC4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CFAP99D6REC4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CFAP99D6REC4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.75■■□□□ 1.07
CFAP99D6REC4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.75■■□□□ 1.07
CFAP99D6REC4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.75■■□□□ 1.07
CFAP99D6REC4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP99D6REC4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP99D6REC4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP99D6REC4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.75■■□□□ 1.07
CFAP99D6REC4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CFAP99D6REC4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CFAP99D6REC4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CFAP99D6REC4 EDA-201ENST00000338901 1233 ntBASIC21.74■■□□□ 1.07
CFAP99D6REC4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.74■■□□□ 1.07
CFAP99D6REC4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CFAP99D6REC4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
CFAP99D6REC4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CFAP99D6REC4 C9orf163-202ENST00000624034 2573 ntBASIC21.74■■□□□ 1.07
CFAP99D6REC4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.74■■□□□ 1.07
CFAP99D6REC4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CFAP99D6REC4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.73■■□□□ 1.07
CFAP99D6REC4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CFAP99D6REC4 AC133561.4-201ENST00000566112 224 ntBASIC21.73■■□□□ 1.07
CFAP99D6REC4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.73■■□□□ 1.07
CFAP99D6REC4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CFAP99D6REC4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CFAP99D6REC4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.73■■□□□ 1.07
CFAP99D6REC4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CFAP99D6REC4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CFAP99D6REC4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CFAP99D6REC4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CFAP99D6REC4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CFAP99D6REC4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CFAP99D6REC4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CFAP99D6REC4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.72■■□□□ 1.07
CFAP99D6REC4 AC068587.7-201ENST00000641602 218 ntBASIC21.72■■□□□ 1.07
CFAP99D6REC4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CFAP99D6REC4 LINC01960-201ENST00000563759 1884 ntBASIC21.72■■□□□ 1.07
CFAP99D6REC4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CFAP99D6REC4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CFAP99D6REC4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CFAP99D6REC4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CFAP99D6REC4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CFAP99D6REC4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.71■■□□□ 1.07
CFAP99D6REC4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CFAP99D6REC4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CFAP99D6REC4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CFAP99D6REC4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CFAP99D6REC4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CFAP99D6REC4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.71■■□□□ 1.07
CFAP99D6REC4 BX842568.3-201ENST00000418104 571 ntBASIC21.71■■□□□ 1.07
CFAP99D6REC4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.71■■□□□ 1.07
CFAP99D6REC4 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.71■■□□□ 1.07
CFAP99D6REC4 AL355001.2-201ENST00000620617 1191 ntBASIC21.71■■□□□ 1.07
CFAP99D6REC4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CFAP99D6REC4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms