Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.08
CFAP99D6REC4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CFAP99D6REC4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP99D6REC4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
CFAP99D6REC4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP99D6REC4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP99D6REC4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.78■■□□□ 1.08
CFAP99D6REC4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP99D6REC4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CFAP99D6REC4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP99D6REC4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP99D6REC4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP99D6REC4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP99D6REC4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP99D6REC4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP99D6REC4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.78■■□□□ 1.08
CFAP99D6REC4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP99D6REC4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CFAP99D6REC4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CFAP99D6REC4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CFAP99D6REC4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.77■■□□□ 1.08
CFAP99D6REC4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CFAP99D6REC4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.77■■□□□ 1.08
CFAP99D6REC4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.77■■□□□ 1.08
CFAP99D6REC4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.77■■□□□ 1.08
CFAP99D6REC4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CFAP99D6REC4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.77■■□□□ 1.08
CFAP99D6REC4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.77■■□□□ 1.08
CFAP99D6REC4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CFAP99D6REC4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CFAP99D6REC4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CFAP99D6REC4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.77■■□□□ 1.08
CFAP99D6REC4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.07
CFAP99D6REC4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CFAP99D6REC4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CFAP99D6REC4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
CFAP99D6REC4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
CFAP99D6REC4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CFAP99D6REC4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.75■■□□□ 1.07
CFAP99D6REC4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CFAP99D6REC4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP99D6REC4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP99D6REC4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP99D6REC4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP99D6REC4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CFAP99D6REC4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CFAP99D6REC4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.75■■□□□ 1.07
CFAP99D6REC4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.75■■□□□ 1.07
CFAP99D6REC4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.75■■□□□ 1.07
CFAP99D6REC4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP99D6REC4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP99D6REC4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP99D6REC4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.75■■□□□ 1.07
CFAP99D6REC4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CFAP99D6REC4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CFAP99D6REC4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CFAP99D6REC4 EDA-201ENST00000338901 1233 ntBASIC21.74■■□□□ 1.07
CFAP99D6REC4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.74■■□□□ 1.07
CFAP99D6REC4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CFAP99D6REC4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
CFAP99D6REC4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CFAP99D6REC4 C9orf163-202ENST00000624034 2573 ntBASIC21.74■■□□□ 1.07
CFAP99D6REC4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.74■■□□□ 1.07
CFAP99D6REC4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CFAP99D6REC4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.73■■□□□ 1.07
CFAP99D6REC4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CFAP99D6REC4 AC133561.4-201ENST00000566112 224 ntBASIC21.73■■□□□ 1.07
CFAP99D6REC4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.73■■□□□ 1.07
CFAP99D6REC4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CFAP99D6REC4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CFAP99D6REC4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.73■■□□□ 1.07
CFAP99D6REC4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CFAP99D6REC4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CFAP99D6REC4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CFAP99D6REC4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CFAP99D6REC4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CFAP99D6REC4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CFAP99D6REC4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CFAP99D6REC4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.72■■□□□ 1.07
CFAP99D6REC4 AC068587.7-201ENST00000641602 218 ntBASIC21.72■■□□□ 1.07
CFAP99D6REC4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CFAP99D6REC4 LINC01960-201ENST00000563759 1884 ntBASIC21.72■■□□□ 1.07
CFAP99D6REC4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CFAP99D6REC4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CFAP99D6REC4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CFAP99D6REC4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CFAP99D6REC4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CFAP99D6REC4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.71■■□□□ 1.07
CFAP99D6REC4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CFAP99D6REC4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CFAP99D6REC4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CFAP99D6REC4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CFAP99D6REC4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CFAP99D6REC4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.71■■□□□ 1.07
CFAP99D6REC4 BX842568.3-201ENST00000418104 571 ntBASIC21.71■■□□□ 1.07
CFAP99D6REC4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.71■■□□□ 1.07
CFAP99D6REC4 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.71■■□□□ 1.07
CFAP99D6REC4 AL355001.2-201ENST00000620617 1191 ntBASIC21.71■■□□□ 1.07
CFAP99D6REC4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CFAP99D6REC4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms