Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM235A6NFC5 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
TMEM235A6NFC5 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.67■□□□□ 0.58
TMEM235A6NFC5 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
TMEM235A6NFC5 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM235A6NFC5 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM235A6NFC5 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM235A6NFC5 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.67■□□□□ 0.58
TMEM235A6NFC5 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.67■□□□□ 0.58
TMEM235A6NFC5 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.67■□□□□ 0.58
TMEM235A6NFC5 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.67■□□□□ 0.58
TMEM235A6NFC5 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.67■□□□□ 0.58
TMEM235A6NFC5 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.67■□□□□ 0.58
TMEM235A6NFC5 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM235A6NFC5 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.66■□□□□ 0.58
TMEM235A6NFC5 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM235A6NFC5 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.66■□□□□ 0.58
TMEM235A6NFC5 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TMEM235A6NFC5 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM235A6NFC5 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM235A6NFC5 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM235A6NFC5 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.66■□□□□ 0.58
TMEM235A6NFC5 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TMEM235A6NFC5 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM235A6NFC5 SLC25A24-204ENST00000569674 2357 ntBASIC18.66■□□□□ 0.58
TMEM235A6NFC5 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM235A6NFC5 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM235A6NFC5 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM235A6NFC5 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM235A6NFC5 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM235A6NFC5 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM235A6NFC5 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM235A6NFC5 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM235A6NFC5 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM235A6NFC5 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TMEM235A6NFC5 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TMEM235A6NFC5 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TMEM235A6NFC5 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.65■□□□□ 0.58
TMEM235A6NFC5 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.65■□□□□ 0.58
TMEM235A6NFC5 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM235A6NFC5 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM235A6NFC5 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM235A6NFC5 AC005229.4-201ENST00000610085 2198 ntBASIC18.65■□□□□ 0.58
TMEM235A6NFC5 LINC01960-201ENST00000563759 1884 ntBASIC18.65■□□□□ 0.58
TMEM235A6NFC5 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TMEM235A6NFC5 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
TMEM235A6NFC5 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TMEM235A6NFC5 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
TMEM235A6NFC5 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TMEM235A6NFC5 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM235A6NFC5 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM235A6NFC5 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.64■□□□□ 0.57
TMEM235A6NFC5 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM235A6NFC5 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEM235A6NFC5 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEM235A6NFC5 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM235A6NFC5 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TMEM235A6NFC5 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TMEM235A6NFC5 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM235A6NFC5 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM235A6NFC5 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.63■□□□□ 0.57
TMEM235A6NFC5 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM235A6NFC5 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.63■□□□□ 0.57
TMEM235A6NFC5 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.63■□□□□ 0.57
TMEM235A6NFC5 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM235A6NFC5 BHLHE23-202ENST00000612929 1109 ntBASIC18.63■□□□□ 0.57
TMEM235A6NFC5 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM235A6NFC5 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TMEM235A6NFC5 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.63■□□□□ 0.57
TMEM235A6NFC5 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.63■□□□□ 0.57
TMEM235A6NFC5 LINC01529-204ENST00000636474 1715 ntBASIC18.63■□□□□ 0.57
TMEM235A6NFC5 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.63■□□□□ 0.57
TMEM235A6NFC5 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM235A6NFC5 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM235A6NFC5 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM235A6NFC5 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM235A6NFC5 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM235A6NFC5 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.62■□□□□ 0.57
TMEM235A6NFC5 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM235A6NFC5 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM235A6NFC5 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.62■□□□□ 0.57
TMEM235A6NFC5 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM235A6NFC5 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM235A6NFC5 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TMEM235A6NFC5 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM235A6NFC5 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM235A6NFC5 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM235A6NFC5 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
TMEM235A6NFC5 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM235A6NFC5 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.61■□□□□ 0.57
TMEM235A6NFC5 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM235A6NFC5 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM235A6NFC5 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM235A6NFC5 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.61■□□□□ 0.57
TMEM235A6NFC5 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.61■□□□□ 0.57
TMEM235A6NFC5 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM235A6NFC5 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM235A6NFC5 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
TMEM235A6NFC5 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.6■□□□□ 0.57
TMEM235A6NFC5 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms