Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.56■□□□□ 0.4
TCRBV4S1A1TA0A5B7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.56■□□□□ 0.4
TCRBV4S1A1TA0A5B7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.56■□□□□ 0.4
TCRBV4S1A1TA0A5B7 AP001330.3-201ENST00000520123 633 ntBASIC17.56■□□□□ 0.4
TCRBV4S1A1TA0A5B7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
TCRBV4S1A1TA0A5B7 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV4S1A1TA0A5B7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV4S1A1TA0A5B7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV4S1A1TA0A5B7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV4S1A1TA0A5B7 AC079630.1-202ENST00000618127 1840 ntBASIC17.56■□□□□ 0.4
TCRBV4S1A1TA0A5B7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV4S1A1TA0A5B7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TCRBV4S1A1TA0A5B7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TCRBV4S1A1TA0A5B7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV4S1A1TA0A5B7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV4S1A1TA0A5B7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV4S1A1TA0A5B7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV4S1A1TA0A5B7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV4S1A1TA0A5B7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TCRBV4S1A1TA0A5B7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV4S1A1TA0A5B7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV4S1A1TA0A5B7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.55■□□□□ 0.4
TCRBV4S1A1TA0A5B7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV4S1A1TA0A5B7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV4S1A1TA0A5B7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV4S1A1TA0A5B7 MIR939-201ENST00000401314 82 ntBASIC17.55■□□□□ 0.4
TCRBV4S1A1TA0A5B7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV4S1A1TA0A5B7 AC091305.1-201ENST00000479476 895 ntBASIC17.55■□□□□ 0.4
TCRBV4S1A1TA0A5B7 AC008764.7-201ENST00000593779 1081 ntBASIC17.55■□□□□ 0.4
TCRBV4S1A1TA0A5B7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.55■□□□□ 0.4
TCRBV4S1A1TA0A5B7 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV4S1A1TA0A5B7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV4S1A1TA0A5B7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV4S1A1TA0A5B7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.55■□□□□ 0.4
TCRBV4S1A1TA0A5B7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TCRBV4S1A1TA0A5B7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TCRBV4S1A1TA0A5B7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.54■□□□□ 0.4
TCRBV4S1A1TA0A5B7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TCRBV4S1A1TA0A5B7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TCRBV4S1A1TA0A5B7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.54■□□□□ 0.4
TCRBV4S1A1TA0A5B7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TCRBV4S1A1TA0A5B7 AC006455.2-201ENST00000429931 906 ntBASIC17.54■□□□□ 0.4
TCRBV4S1A1TA0A5B7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.54■□□□□ 0.4
TCRBV4S1A1TA0A5B7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TCRBV4S1A1TA0A5B7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TCRBV4S1A1TA0A5B7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TCRBV4S1A1TA0A5B7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TCRBV4S1A1TA0A5B7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TCRBV4S1A1TA0A5B7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TCRBV4S1A1TA0A5B7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TCRBV4S1A1TA0A5B7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.53■□□□□ 0.4
TCRBV4S1A1TA0A5B7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.53■□□□□ 0.4
TCRBV4S1A1TA0A5B7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV4S1A1TA0A5B7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV4S1A1TA0A5B7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV4S1A1TA0A5B7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV4S1A1TA0A5B7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.53■□□□□ 0.4
TCRBV4S1A1TA0A5B7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.53■□□□□ 0.4
TCRBV4S1A1TA0A5B7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.53■□□□□ 0.4
TCRBV4S1A1TA0A5B7 AC027682.1-201ENST00000562846 899 ntBASIC17.53■□□□□ 0.4
TCRBV4S1A1TA0A5B7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.53■□□□□ 0.4
TCRBV4S1A1TA0A5B7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.53■□□□□ 0.4
TCRBV4S1A1TA0A5B7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV4S1A1TA0A5B7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV4S1A1TA0A5B7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV4S1A1TA0A5B7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.52■□□□□ 0.4
TCRBV4S1A1TA0A5B7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV4S1A1TA0A5B7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.52■□□□□ 0.4
TCRBV4S1A1TA0A5B7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV4S1A1TA0A5B7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV4S1A1TA0A5B7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV4S1A1TA0A5B7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TCRBV4S1A1TA0A5B7 AC242852.2-201ENST00000615738 1807 ntBASIC17.52■□□□□ 0.4
TCRBV4S1A1TA0A5B7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TCRBV4S1A1TA0A5B7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV4S1A1TA0A5B7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV4S1A1TA0A5B7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.52■□□□□ 0.4
TCRBV4S1A1TA0A5B7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV4S1A1TA0A5B7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TCRBV4S1A1TA0A5B7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.52■□□□□ 0.4
TCRBV4S1A1TA0A5B7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV4S1A1TA0A5B7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV4S1A1TA0A5B7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV4S1A1TA0A5B7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV4S1A1TA0A5B7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV4S1A1TA0A5B7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.52■□□□□ 0.4
TCRBV4S1A1TA0A5B7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
TCRBV4S1A1TA0A5B7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.52■□□□□ 0.39
TCRBV4S1A1TA0A5B7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TCRBV4S1A1TA0A5B7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TCRBV4S1A1TA0A5B7 RASA4CP-201ENST00000424092 1398 ntBASIC17.52■□□□□ 0.39
TCRBV4S1A1TA0A5B7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
TCRBV4S1A1TA0A5B7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TCRBV4S1A1TA0A5B7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TCRBV4S1A1TA0A5B7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TCRBV4S1A1TA0A5B7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TCRBV4S1A1TA0A5B7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TCRBV4S1A1TA0A5B7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.51■□□□□ 0.39
TCRBV4S1A1TA0A5B7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.51■□□□□ 0.39
TCRBV4S1A1TA0A5B7 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms