Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV4A0A0C4DH28 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV4A0A0C4DH28 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC15.68■□□□□ 0.1
TRGV4A0A0C4DH28 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC15.67■□□□□ 0.1
TRGV4A0A0C4DH28 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC15.67■□□□□ 0.1
TRGV4A0A0C4DH28 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRGV4A0A0C4DH28 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRGV4A0A0C4DH28 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC15.67■□□□□ 0.1
TRGV4A0A0C4DH28 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC15.67■□□□□ 0.1
TRGV4A0A0C4DH28 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC15.67■□□□□ 0.1
TRGV4A0A0C4DH28 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRGV4A0A0C4DH28 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRGV4A0A0C4DH28 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRGV4A0A0C4DH28 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TRGV4A0A0C4DH28 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
TRGV4A0A0C4DH28 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRGV4A0A0C4DH28 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV4A0A0C4DH28 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV4A0A0C4DH28 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV4A0A0C4DH28 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV4A0A0C4DH28 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TRGV4A0A0C4DH28 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV4A0A0C4DH28 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV4A0A0C4DH28 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV4A0A0C4DH28 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV4A0A0C4DH28 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV4A0A0C4DH28 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TRGV4A0A0C4DH28 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV4A0A0C4DH28 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC15.66■□□□□ 0.1
TRGV4A0A0C4DH28 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC15.66■□□□□ 0.1
TRGV4A0A0C4DH28 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV4A0A0C4DH28 AC092171.4-201ENST00000609130 632 ntBASIC15.66■□□□□ 0.1
TRGV4A0A0C4DH28 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV4A0A0C4DH28 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV4A0A0C4DH28 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC15.66■□□□□ 0.1
TRGV4A0A0C4DH28 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRGV4A0A0C4DH28 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRGV4A0A0C4DH28 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC15.65■□□□□ 0.1
TRGV4A0A0C4DH28 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV4A0A0C4DH28 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRGV4A0A0C4DH28 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC15.65■□□□□ 0.1
TRGV4A0A0C4DH28 ESRRAP2-201ENST00000418437 1549 ntBASIC15.65■□□□□ 0.1
TRGV4A0A0C4DH28 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.65■□□□□ 0.1
TRGV4A0A0C4DH28 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV4A0A0C4DH28 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV4A0A0C4DH28 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV4A0A0C4DH28 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC15.65■□□□□ 0.1
TRGV4A0A0C4DH28 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC15.65■□□□□ 0.1
TRGV4A0A0C4DH28 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV4A0A0C4DH28 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC15.65■□□□□ 0.1
TRGV4A0A0C4DH28 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV4A0A0C4DH28 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV4A0A0C4DH28 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV4A0A0C4DH28 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV4A0A0C4DH28 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.65■□□□□ 0.1
TRGV4A0A0C4DH28 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRGV4A0A0C4DH28 AC004687.1-201ENST00000579003 1625 ntBASIC15.65■□□□□ 0.1
TRGV4A0A0C4DH28 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
TRGV4A0A0C4DH28 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.1
TRGV4A0A0C4DH28 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC15.64■□□□□ 0.09
TRGV4A0A0C4DH28 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV4A0A0C4DH28 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV4A0A0C4DH28 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV4A0A0C4DH28 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV4A0A0C4DH28 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC15.64■□□□□ 0.09
TRGV4A0A0C4DH28 RPP21-222ENST00000433076 577 ntTSL 2 BASIC15.64■□□□□ 0.09
TRGV4A0A0C4DH28 TRIR-202ENST00000588213 841 ntTSL 3 BASIC15.64■□□□□ 0.09
TRGV4A0A0C4DH28 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV4A0A0C4DH28 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV4A0A0C4DH28 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV4A0A0C4DH28 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV4A0A0C4DH28 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV4A0A0C4DH28 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV4A0A0C4DH28 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
TRGV4A0A0C4DH28 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV4A0A0C4DH28 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC15.64■□□□□ 0.09
TRGV4A0A0C4DH28 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV4A0A0C4DH28 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV4A0A0C4DH28 GATM-206ENST00000558336 1522 ntTSL 2 BASIC15.63■□□□□ 0.09
TRGV4A0A0C4DH28 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV4A0A0C4DH28 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV4A0A0C4DH28 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
TRGV4A0A0C4DH28 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV4A0A0C4DH28 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV4A0A0C4DH28 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRGV4A0A0C4DH28 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV4A0A0C4DH28 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TRGV4A0A0C4DH28 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV4A0A0C4DH28 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV4A0A0C4DH28 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRGV4A0A0C4DH28 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC15.63■□□□□ 0.09
TRGV4A0A0C4DH28 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV4A0A0C4DH28 AC099791.2-201ENST00000605725 427 ntBASIC15.63■□□□□ 0.09
TRGV4A0A0C4DH28 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV4A0A0C4DH28 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV4A0A0C4DH28 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV4A0A0C4DH28 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
TRGV4A0A0C4DH28 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC15.63■□□□□ 0.09
TRGV4A0A0C4DH28 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV4A0A0C4DH28 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms