Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV20A0A0B4J274 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TRAV20A0A0B4J274 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV20A0A0B4J274 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV20A0A0B4J274 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV20A0A0B4J274 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV20A0A0B4J274 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.49■□□□□ 0.55
TRAV20A0A0B4J274 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV20A0A0B4J274 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV20A0A0B4J274 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV20A0A0B4J274 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV20A0A0B4J274 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV20A0A0B4J274 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.49■□□□□ 0.55
TRAV20A0A0B4J274 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV20A0A0B4J274 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV20A0A0B4J274 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV20A0A0B4J274 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TRAV20A0A0B4J274 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.48■□□□□ 0.55
TRAV20A0A0B4J274 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.48■□□□□ 0.55
TRAV20A0A0B4J274 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.48■□□□□ 0.55
TRAV20A0A0B4J274 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAV20A0A0B4J274 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV20A0A0B4J274 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.48■□□□□ 0.55
TRAV20A0A0B4J274 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV20A0A0B4J274 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV20A0A0B4J274 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV20A0A0B4J274 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV20A0A0B4J274 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV20A0A0B4J274 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.47■□□□□ 0.55
TRAV20A0A0B4J274 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TRAV20A0A0B4J274 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
TRAV20A0A0B4J274 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.47■□□□□ 0.55
TRAV20A0A0B4J274 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAV20A0A0B4J274 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.47■□□□□ 0.55
TRAV20A0A0B4J274 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAV20A0A0B4J274 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV20A0A0B4J274 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.47■□□□□ 0.55
TRAV20A0A0B4J274 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV20A0A0B4J274 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV20A0A0B4J274 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV20A0A0B4J274 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV20A0A0B4J274 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
TRAV20A0A0B4J274 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV20A0A0B4J274 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV20A0A0B4J274 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV20A0A0B4J274 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV20A0A0B4J274 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
TRAV20A0A0B4J274 AC087623.3-201ENST00000607047 1098 ntBASIC18.46■□□□□ 0.55
TRAV20A0A0B4J274 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TRAV20A0A0B4J274 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TRAV20A0A0B4J274 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV20A0A0B4J274 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV20A0A0B4J274 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
TRAV20A0A0B4J274 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TRAV20A0A0B4J274 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV20A0A0B4J274 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV20A0A0B4J274 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV20A0A0B4J274 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV20A0A0B4J274 FP325331.1-202ENST00000623531 1380 ntBASIC18.45■□□□□ 0.54
TRAV20A0A0B4J274 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV20A0A0B4J274 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV20A0A0B4J274 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.45■□□□□ 0.54
TRAV20A0A0B4J274 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
TRAV20A0A0B4J274 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TRAV20A0A0B4J274 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV20A0A0B4J274 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
TRAV20A0A0B4J274 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV20A0A0B4J274 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.45■□□□□ 0.54
TRAV20A0A0B4J274 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TRAV20A0A0B4J274 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV20A0A0B4J274 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV20A0A0B4J274 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV20A0A0B4J274 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAV20A0A0B4J274 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TRAV20A0A0B4J274 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.44■□□□□ 0.54
TRAV20A0A0B4J274 SLC47A1P1-202ENST00000449666 945 ntBASIC18.44■□□□□ 0.54
TRAV20A0A0B4J274 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAV20A0A0B4J274 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TRAV20A0A0B4J274 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV20A0A0B4J274 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.44■□□□□ 0.54
TRAV20A0A0B4J274 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV20A0A0B4J274 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TRAV20A0A0B4J274 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV20A0A0B4J274 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.43■□□□□ 0.54
TRAV20A0A0B4J274 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV20A0A0B4J274 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
TRAV20A0A0B4J274 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TRAV20A0A0B4J274 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV20A0A0B4J274 TSPY26P-201ENST00000476365 1326 ntBASIC18.43■□□□□ 0.54
TRAV20A0A0B4J274 AC133637.1-201ENST00000624115 1537 ntBASIC18.43■□□□□ 0.54
TRAV20A0A0B4J274 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV20A0A0B4J274 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV20A0A0B4J274 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV20A0A0B4J274 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV20A0A0B4J274 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV20A0A0B4J274 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV20A0A0B4J274 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.42■□□□□ 0.54
TRAV20A0A0B4J274 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV20A0A0B4J274 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TRAV20A0A0B4J274 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms