Protein–RNA interactions for Protein: A0A075B6M9

TRBV23OR9-2, T-cell receptor beta variable 23/OR9-2 (pseudogene) (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23OR9-2A0A075B6M9 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.38■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 AL354811.1-201ENST00000610286 706 ntBASIC21.38■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.38■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.38■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.37■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.37■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 YBX1P1-201ENST00000445822 960 ntBASIC21.37■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.37■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.36■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.36■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.36■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.36■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.36■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.36■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.36■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.36■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.35■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.35■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.35■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.35■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 AC104564.3-201ENST00000582367 638 ntBASIC21.35■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.35■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.35■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.35■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.34■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 AC027612.3-201ENST00000413684 1047 ntBASIC21.34■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 AC034268.1-201ENST00000441047 882 ntBASIC21.34■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.34■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.34■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.33■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 AC010141.3-201ENST00000456659 717 ntBASIC21.33■■□□□ 1.01
TRBV23OR9-2A0A075B6M9 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.33■■□□□ 1
TRBV23OR9-2A0A075B6M9 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.33■■□□□ 1
TRBV23OR9-2A0A075B6M9 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.32■■□□□ 1
TRBV23OR9-2A0A075B6M9 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.32■■□□□ 1
TRBV23OR9-2A0A075B6M9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.32■■□□□ 1
TRBV23OR9-2A0A075B6M9 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.32■■□□□ 1
TRBV23OR9-2A0A075B6M9 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
TRBV23OR9-2A0A075B6M9 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRBV23OR9-2A0A075B6M9 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
TRBV23OR9-2A0A075B6M9 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRBV23OR9-2A0A075B6M9 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.32■■□□□ 1
TRBV23OR9-2A0A075B6M9 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRBV23OR9-2A0A075B6M9 AC087239.1-201ENST00000622671 572 ntBASIC21.32■■□□□ 1
TRBV23OR9-2A0A075B6M9 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRBV23OR9-2A0A075B6M9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.32■■□□□ 1
TRBV23OR9-2A0A075B6M9 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRBV23OR9-2A0A075B6M9 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRBV23OR9-2A0A075B6M9 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRBV23OR9-2A0A075B6M9 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.32■■□□□ 1
TRBV23OR9-2A0A075B6M9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
TRBV23OR9-2A0A075B6M9 DUSP8P3-201ENST00000399571 1760 ntBASIC21.31■■□□□ 1
TRBV23OR9-2A0A075B6M9 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRBV23OR9-2A0A075B6M9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.31■■□□□ 1
TRBV23OR9-2A0A075B6M9 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRBV23OR9-2A0A075B6M9 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRBV23OR9-2A0A075B6M9 DUX4L2-201ENST00000561772 1275 ntBASIC21.31■■□□□ 1
TRBV23OR9-2A0A075B6M9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.31■■□□□ 1
TRBV23OR9-2A0A075B6M9 DUX4L6-201ENST00000626483 1275 ntBASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms