Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 NR1D1-201ENST00000246672 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAF6Q9Y4K3 PRAMEF14-201ENST00000334600 1690 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TRAF6Q9Y4K3 GRAMD1B-215ENST00000638086 2665 ntTSL 5 BASIC12.6□□□□□ -0.39
TRAF6Q9Y4K3 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC12.6□□□□□ -0.39
TRAF6Q9Y4K3 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
TRAF6Q9Y4K3 CELF3-202ENST00000290585 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAF6Q9Y4K3 RBM4-205ENST00000409406 2321 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
TRAF6Q9Y4K3 FMO3-201ENST00000367755 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAF6Q9Y4K3 ARMC9-215ENST00000614261 4975 ntTSL 5 BASIC12.6□□□□□ -0.39
TRAF6Q9Y4K3 NFXL1-201ENST00000329043 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAF6Q9Y4K3 ANKRD13A-201ENST00000261739 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAF6Q9Y4K3 ACSF3-218ENST00000614302 3751 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 CHI3L2-201ENST00000369744 1489 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 VPS16-202ENST00000380445 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 PMEL-215ENST00000550464 1867 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 LIFR-AS1-201ENST00000500733 3803 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 PAAF1-214ENST00000544552 1612 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 PLEKHM1-201ENST00000430334 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 HRC-203ENST00000595625 2044 ntTSL 5 BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 LHX6-204ENST00000394319 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 LINC02125-201ENST00000512279 2198 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 ABCB4-201ENST00000265723 4020 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 ATF4P4-201ENST00000393544 1930 ntBASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 PAX9-202ENST00000402703 3104 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 AC026316.1-201ENST00000398900 414 ntBASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 PRR13-202ENST00000429243 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 AL049597.1-201ENST00000447415 555 ntBASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 RPL35P1-201ENST00000450819 370 ntBASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 AC120057.1-201ENST00000483947 663 ntBASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 RN7SL23P-201ENST00000484055 275 ntBASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 RPS23-207ENST00000511844 530 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 PRDX2P3-201ENST00000515779 586 ntBASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 FAM86B3P-203ENST00000523992 854 ntBASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 ARHGEF4-212ENST00000525839 3828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 CR383656.3-201ENST00000551315 183 ntBASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 MIR3907-201ENST00000579424 151 ntBASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 AC025048.4-201ENST00000589740 699 ntTSL 3 BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 MTHFSD-201ENST00000360900 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 TSPAN6-201ENST00000373020 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 AC068669.1-201ENST00000623793 2228 ntBASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 KRT40-201ENST00000377755 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 ACR-201ENST00000216139 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 DUSP4-202ENST00000240101 2959 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 MASP2-201ENST00000400897 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 ZWINT-203ENST00000373944 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 TP53TG3B-201ENST00000341305 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 YTHDF2-208ENST00000541996 2719 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 RIOK3-201ENST00000339486 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 CCT7P1-201ENST00000406551 1611 ntBASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 MICU1-202ENST00000398761 2488 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
TRAF6Q9Y4K3 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
TRAF6Q9Y4K3 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
TRAF6Q9Y4K3 VIPAS39-206ENST00000553888 2934 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
TRAF6Q9Y4K3 CARD14-209ENST00000573882 4537 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
TRAF6Q9Y4K3 UGT1A1-201ENST00000305208 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAF6Q9Y4K3 TSPEAR-201ENST00000323084 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAF6Q9Y4K3 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRAF6Q9Y4K3 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRAF6Q9Y4K3 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
TRAF6Q9Y4K3 XYLB-203ENST00000427323 1666 ntTSL 2 BASIC12.58□□□□□ -0.4
TRAF6Q9Y4K3 ADCK1-202ENST00000341211 1972 ntTSL 2 BASIC12.58□□□□□ -0.4
TRAF6Q9Y4K3 CAPN10-AS1-201ENST00000567819 4000 ntBASIC12.58□□□□□ -0.4
TRAF6Q9Y4K3 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAF6Q9Y4K3 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
TRAF6Q9Y4K3 TIMP1-201ENST00000218388 892 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAF6Q9Y4K3 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAF6Q9Y4K3 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAF6Q9Y4K3 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAF6Q9Y4K3 MYL1-202ENST00000352451 1065 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRAF6Q9Y4K3 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms