Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
NCDNQ9UBB6 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NCDNQ9UBB6 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NCDNQ9UBB6 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.78□□□□□ -0.36
NCDNQ9UBB6 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
NCDNQ9UBB6 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NCDNQ9UBB6 AC015959.1-201ENST00000623263 1377 ntBASIC12.78□□□□□ -0.36
NCDNQ9UBB6 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC12.78□□□□□ -0.36
NCDNQ9UBB6 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
NCDNQ9UBB6 TMEM106A-204ENST00000588659 1437 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
NCDNQ9UBB6 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NCDNQ9UBB6 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.78□□□□□ -0.36
NCDNQ9UBB6 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
NCDNQ9UBB6 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NCDNQ9UBB6 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NCDNQ9UBB6 LCMT2-201ENST00000305641 6957 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
NCDNQ9UBB6 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NCDNQ9UBB6 PPATP1-201ENST00000496669 1547 ntBASIC12.78□□□□□ -0.36
NCDNQ9UBB6 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
NCDNQ9UBB6 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
NCDNQ9UBB6 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NCDNQ9UBB6 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NCDNQ9UBB6 AL359845.1-201ENST00000458202 1648 ntBASIC12.77□□□□□ -0.36
NCDNQ9UBB6 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
NCDNQ9UBB6 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
NCDNQ9UBB6 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NCDNQ9UBB6 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
NCDNQ9UBB6 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.36
NCDNQ9UBB6 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NCDNQ9UBB6 RETREG3-203ENST00000585894 1733 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
NCDNQ9UBB6 NAMA-207ENST00000605707 1748 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
NCDNQ9UBB6 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.77□□□□□ -0.36
NCDNQ9UBB6 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NCDNQ9UBB6 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 PCTP-202ENST00000325214 1856 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 TMEM107-201ENST00000316425 756 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 RPL5-202ENST00000370321 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 ZNF451-205ENST00000370710 375 ntTSL 2 BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 CTF2P-201ENST00000412003 604 ntBASIC12.77□□□□□ -0.37
NCDNQ9UBB6 SSR4P1-201ENST00000415143 412 ntBASIC12.77□□□□□ -0.37
NCDNQ9UBB6 AP001625.3-201ENST00000416179 449 ntTSL 2 BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 GGT8P-201ENST00000418938 532 ntBASIC12.77□□□□□ -0.37
NCDNQ9UBB6 LINC00189-201ENST00000420364 989 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 AL365194.1-201ENST00000440032 361 ntTSL 3 BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 AL096677.1-201ENST00000442884 814 ntTSL 3 BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 NDUFC1-206ENST00000505036 809 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 AC020893.2-201ENST00000506083 723 ntBASIC12.77□□□□□ -0.37
NCDNQ9UBB6 AC233724.7-201ENST00000511476 253 ntBASIC12.77□□□□□ -0.37
NCDNQ9UBB6 SPTY2D1-AS1-202ENST00000511927 573 ntAPPRIS ALT2 TSL 4 BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 AC096713.1-201ENST00000514650 978 ntBASIC12.77□□□□□ -0.37
NCDNQ9UBB6 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 MAF1-204ENST00000532522 1098 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 SEC11A-203ENST00000558134 971 ntTSL 3 BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 AC010601.1-201ENST00000569048 446 ntTSL 5 BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 ADGRG5-207ENST00000615867 762 ntTSL 4 BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 AL731555.1-201ENST00000634547 1259 ntBASIC12.77□□□□□ -0.37
NCDNQ9UBB6 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 APTX-206ENST00000379825 2023 ntTSL 2 BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 TUBAP-201ENST00000425085 1352 ntBASIC12.77□□□□□ -0.37
NCDNQ9UBB6 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 FAM9A-201ENST00000381003 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NCDNQ9UBB6 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
NCDNQ9UBB6 ZFAND1-201ENST00000220669 1798 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
NCDNQ9UBB6 ZFAND1-221ENST00000523096 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NCDNQ9UBB6 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NCDNQ9UBB6 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NCDNQ9UBB6 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NCDNQ9UBB6 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
NCDNQ9UBB6 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
NCDNQ9UBB6 USMG5-205ENST00000369825 789 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
NCDNQ9UBB6 RPS21-202ENST00000370562 1002 ntTSL 2 BASIC12.76□□□□□ -0.37
NCDNQ9UBB6 LIMS2-203ENST00000409254 867 ntTSL 3 BASIC12.76□□□□□ -0.37
NCDNQ9UBB6 OR7E33P-201ENST00000437705 966 ntBASIC12.76□□□□□ -0.37
NCDNQ9UBB6 AL390061.1-201ENST00000457804 293 ntTSL 2 BASIC12.76□□□□□ -0.37
NCDNQ9UBB6 MIR2110-201ENST00000459421 75 ntBASIC12.76□□□□□ -0.37
NCDNQ9UBB6 ZBED3-AS1-206ENST00000508401 582 ntTSL 2 BASIC12.76□□□□□ -0.37
NCDNQ9UBB6 PIMREG-209ENST00000576056 833 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms