Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SLC1A1P43005 SEC22C-205ENST00000417572 1513 ntTSL 3 BASIC13.5□□□□□ -0.25
SLC1A1P43005 PRKAG1-205ENST00000547306 1531 ntTSL 5 BASIC13.5□□□□□ -0.25
SLC1A1P43005 COASY-201ENST00000393818 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A1P43005 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC13.5□□□□□ -0.25
SLC1A1P43005 AS3MT-201ENST00000369880 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A1P43005 PDHA1-206ENST00000422285 3310 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A1P43005 CICP19-201ENST00000632944 2357 ntBASIC13.5□□□□□ -0.25
SLC1A1P43005 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A1P43005 LINC00910-201ENST00000341011 2303 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A1P43005 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A1P43005 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A1P43005 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC13.5□□□□□ -0.25
SLC1A1P43005 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A1P43005 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A1P43005 MPV17-204ENST00000399052 749 ntTSL 4 BASIC13.5□□□□□ -0.25
SLC1A1P43005 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC13.5□□□□□ -0.25
SLC1A1P43005 ASLP1-201ENST00000428790 637 ntBASIC13.5□□□□□ -0.25
SLC1A1P43005 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC13.5□□□□□ -0.25
SLC1A1P43005 LINC00634-202ENST00000505157 222 ntBASIC13.5□□□□□ -0.25
SLC1A1P43005 KRT18P63-201ENST00000505463 979 ntBASIC13.5□□□□□ -0.25
SLC1A1P43005 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC13.5□□□□□ -0.25
SLC1A1P43005 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A1P43005 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC13.5□□□□□ -0.25
SLC1A1P43005 AL139353.1-202ENST00000547378 474 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
SLC1A1P43005 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC13.5□□□□□ -0.25
SLC1A1P43005 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC13.5□□□□□ -0.25
SLC1A1P43005 AC055717.2-201ENST00000561864 577 ntTSL 4 BASIC13.5□□□□□ -0.25
SLC1A1P43005 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A1P43005 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A1P43005 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SLC1A1P43005 MAP7-208ENST00000617204 4536 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
SLC1A1P43005 ELMO2-201ENST00000290246 3669 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A1P43005 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A1P43005 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A1P43005 KCNC2-201ENST00000298972 3563 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SLC1A1P43005 HSPBAP1-201ENST00000306103 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A1P43005 RPL13AP17-204ENST00000450028 1895 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A1P43005 AC126323.1-203ENST00000562306 2579 ntBASIC13.5□□□□□ -0.25
SLC1A1P43005 AL157838.1-201ENST00000424252 2502 ntTSL 2 BASIC13.5□□□□□ -0.25
SLC1A1P43005 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SLC1A1P43005 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A1P43005 RNF13-201ENST00000344229 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A1P43005 ENPP4-201ENST00000321037 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A1P43005 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SLC1A1P43005 ARL13B-201ENST00000303097 3264 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A1P43005 FP325332.1-201ENST00000624818 2045 ntBASIC13.49□□□□□ -0.25
SLC1A1P43005 ABI1-212ENST00000490841 3188 ntTSL 2 BASIC13.49□□□□□ -0.25
SLC1A1P43005 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A1P43005 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A1P43005 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A1P43005 ATF4P4-201ENST00000393544 1930 ntBASIC13.49□□□□□ -0.25
SLC1A1P43005 CICP7-201ENST00000432723 2477 ntBASIC13.49□□□□□ -0.25
SLC1A1P43005 FAM170A-206ENST00000613773 1374 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A1P43005 MASP2-201ENST00000400897 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A1P43005 RBM3-201ENST00000354480 1884 ntTSL 2 BASIC13.49□□□□□ -0.25
SLC1A1P43005 AC122688.3-201ENST00000623804 3467 ntBASIC13.49□□□□□ -0.25
SLC1A1P43005 ELP4-225ENST00000640533 1801 ntTSL 5 BASIC13.49□□□□□ -0.25
SLC1A1P43005 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A1P43005 FAM76A-202ENST00000234549 992 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A1P43005 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A1P43005 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
SLC1A1P43005 MYH9-202ENST00000401701 789 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A1P43005 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A1P43005 ZNF589-202ENST00000412564 593 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A1P43005 PHBP10-201ENST00000416467 784 ntBASIC13.49□□□□□ -0.25
SLC1A1P43005 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC13.49□□□□□ -0.25
SLC1A1P43005 RPSAP12-201ENST00000435879 888 ntBASIC13.49□□□□□ -0.25
SLC1A1P43005 NR1I3-210ENST00000437437 973 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A1P43005 DLEU1-203ENST00000461527 917 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A1P43005 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC13.49□□□□□ -0.25
SLC1A1P43005 RNA5SP420-201ENST00000516997 137 ntBASIC13.49□□□□□ -0.25
SLC1A1P43005 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
SLC1A1P43005 FAM76A-207ENST00000530324 1027 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A1P43005 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC13.49□□□□□ -0.25
SLC1A1P43005 HNRNPA1P5-201ENST00000558213 966 ntBASIC13.49□□□□□ -0.25
SLC1A1P43005 AC141586.1-203ENST00000567242 366 ntBASIC13.49□□□□□ -0.25
SLC1A1P43005 AC138305.1-201ENST00000568932 561 ntTSL 5 BASIC13.49□□□□□ -0.25
SLC1A1P43005 TYMSP2-201ENST00000589501 424 ntBASIC13.49□□□□□ -0.25
SLC1A1P43005 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A1P43005 NOSIP-204ENST00000596358 1005 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A1P43005 ETV2-207ENST00000619399 994 ntTSL 5 BASIC13.49□□□□□ -0.25
SLC1A1P43005 MVK-202ENST00000392727 1770 ntTSL 2 BASIC13.49□□□□□ -0.25
SLC1A1P43005 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A1P43005 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC13.49□□□□□ -0.25
SLC1A1P43005 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SLC1A1P43005 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A1P43005 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SLC1A1P43005 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A1P43005 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A1P43005 MRGPRX2-201ENST00000329773 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A1P43005 IP6K3-202ENST00000451316 2012 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SLC1A1P43005 ZC2HC1C-203ENST00000524913 4283 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SLC1A1P43005 AC023355.1-202ENST00000612262 4242 ntTSL 5 BASIC13.49□□□□□ -0.25
SLC1A1P43005 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A1P43005 REPS1-205ENST00000415951 2424 ntTSL 5 BASIC13.49□□□□□ -0.25
SLC1A1P43005 VPS16-202ENST00000380445 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A1P43005 SV2A-202ENST00000369146 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SLC1A1P43005 CYP2B7P-201ENST00000541697 1476 ntBASIC13.48□□□□□ -0.25
SLC1A1P43005 FAM105A-201ENST00000274217 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms