Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 ZUFSP-202ENST00000368576 2195 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
POLR2J2Q9GZM3 CASC4P1-201ENST00000456608 1312 ntBASIC12□□□□□ -0.49
POLR2J2Q9GZM3 IGSF9-202ENST00000368094 4044 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
POLR2J2Q9GZM3 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
POLR2J2Q9GZM3 RDH16-202ENST00000398138 2409 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
POLR2J2Q9GZM3 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC12□□□□□ -0.49
POLR2J2Q9GZM3 CHI3L2-201ENST00000369744 1489 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
POLR2J2Q9GZM3 RAB10-201ENST00000264710 3535 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
POLR2J2Q9GZM3 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC12□□□□□ -0.49
POLR2J2Q9GZM3 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC12□□□□□ -0.49
POLR2J2Q9GZM3 NUP62-208ENST00000596217 3590 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
POLR2J2Q9GZM3 VPS26A-203ENST00000395098 2554 ntTSL 5 BASIC12□□□□□ -0.49
POLR2J2Q9GZM3 RAP1A-201ENST00000356415 1586 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
POLR2J2Q9GZM3 DDX56-204ENST00000431640 1554 ntTSL 1 (best) BASIC12□□□□□ -0.49
POLR2J2Q9GZM3 TTI2-204ENST00000520636 1588 ntTSL 5 BASIC12□□□□□ -0.49
POLR2J2Q9GZM3 COL12A1-202ENST00000345356 5886 ntTSL 1 (best) BASIC12□□□□□ -0.49
POLR2J2Q9GZM3 ALDH1L1-202ENST00000393431 2797 ntTSL 1 (best) BASIC12□□□□□ -0.49
POLR2J2Q9GZM3 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 ZIC3-201ENST00000287538 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 POLA2-201ENST00000265465 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 PNPLA6-220ENST00000600737 4195 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 GZF1-201ENST00000338121 4835 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 KCNH6-201ENST00000314672 3062 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 TTC39B-202ENST00000380850 3221 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 DDR1-238ENST00000446312 3202 ntTSL 5 BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 LCE2D-201ENST00000368784 609 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 OR7E155P-201ENST00000412208 1014 ntBASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 OR7E37P-201ENST00000421076 897 ntBASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 MAGEA5-201ENST00000446757 942 ntBASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 IGHJ2P-201ENST00000454480 60 ntBASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 RPL7AP53-201ENST00000468834 793 ntBASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 TJP2-209ENST00000539225 3838 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 ZSCAN29-207ENST00000568898 1389 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 TIPARP-202ENST00000461166 4181 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 FLT4-202ENST00000393347 4292 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 FAM131B-202ENST00000409346 4295 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 DHODH-205ENST00000572887 4824 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 PRKAG1-201ENST00000316299 1683 ntTSL 2 BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 APOBEC3B-203ENST00000402182 1844 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 ATAD2-201ENST00000287394 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 IL1RN-204ENST00000409052 1903 ntTSL 5 BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 DDO-201ENST00000368923 1953 ntTSL 2 BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 TBC1D3B-202ENST00000611257 2081 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 SNHG14-218ENST00000553108 2208 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 SEMA6A-202ENST00000343348 6878 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 ARHGAP36-202ENST00000370921 2447 ntTSL 2 BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 ZNF135-201ENST00000313434 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 LINC01134-203ENST00000442673 3059 ntTSL 2 BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 CORO7-202ENST00000537233 3392 ntTSL 2 BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 HEXIM1-201ENST00000332499 3600 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 ZNF341-201ENST00000342427 3661 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 POLR3E-219ENST00000615879 3655 ntTSL 2 BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 NFXL1-201ENST00000329043 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 WASHC5-201ENST00000318410 4187 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 PAPLN-208ENST00000555445 4282 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 CXorf38-203ENST00000378426 4895 ntTSL 2 BASIC11.99□□□□□ -0.49
POLR2J2Q9GZM3 ARHGAP12-203ENST00000375245 4958 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 NPC1L1-204ENST00000546276 4826 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 OPRK1-206ENST00000613482 4682 ntTSL 5 BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 EDRF1-201ENST00000337623 4387 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 SYTL2-206ENST00000389960 4299 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 ITPRIP-203ENST00000358187 3981 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 PPP1R26P5-201ENST00000416640 3664 ntBASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 UNC13D-202ENST00000412096 3648 ntTSL 2 BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 AL162231.4-201ENST00000564224 3264 ntTSL 2 BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 AC112176.1-201ENST00000565428 3024 ntBASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 SLC25A5-AS1-203ENST00000446986 1874 ntTSL 2 BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 SNX1-211ENST00000560829 1869 ntTSL 5 BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 MED27-201ENST00000292035 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 UMPS-201ENST00000232607 6738 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 BDNF-215ENST00000530861 3918 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms