Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 ZNF621-201ENST00000310898 2404 ntTSL 2 BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 TBC1D3I-203ENST00000621034 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 TSFM-204ENST00000454289 2192 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 INTS6L-201ENST00000370752 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 ALOX5-208ENST00000612635 1945 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 ZFR-201ENST00000265069 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 PLEKHM1P1-205ENST00000582986 5014 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 ZMYND11-203ENST00000381591 4229 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 AC023355.1-202ENST00000612262 4242 ntTSL 5 BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 CD74-203ENST00000377795 1138 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 HIST2H2BA-201ENST00000412169 381 ntBASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 ACTG1P19-201ENST00000418987 1116 ntBASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 AL354861.1-201ENST00000445213 355 ntBASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 RN7SL23P-201ENST00000484055 275 ntBASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 RPS23-204ENST00000507980 836 ntTSL 2 BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 NEU3-205ENST00000531619 582 ntTSL 5 BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 COX5A-205ENST00000568517 582 ntTSL 3 BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 FAM187B2P-201ENST00000577135 713 ntBASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 MIR4527HG-201ENST00000586905 675 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 AC138894.2-201ENST00000602838 371 ntBASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 HELLS-212ENST00000630929 400 ntTSL 5 BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 AL139099.5-201ENST00000635274 300 ntBASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 CRBN-215ENST00000639284 2223 ntTSL 5 BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 LVRN-202ENST00000395528 4544 ntTSL 5 BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 SMIM21-202ENST00000579022 1834 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 SNAP91-212ENST00000520302 4136 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 CYFIP2-222ENST00000620254 4124 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 SCML1-201ENST00000380041 1997 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 LINC01471-201ENST00000461398 3079 ntTSL 5 BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 PLEKHH1-201ENST00000329153 6604 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 PKP4P1-201ENST00000426801 2158 ntBASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 TP73-206ENST00000378288 5120 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
POLR2J2Q9GZM3 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 CD27-AS1-209ENST00000545339 1766 ntTSL 5 BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 TNIP1-201ENST00000315050 2785 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 POLL-203ENST00000370162 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 SLC39A14-204ENST00000381237 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 HTR4-201ENST00000360693 3082 ntTSL 5 BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 RGS3-204ENST00000350696 4387 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 ACADL-201ENST00000233710 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 PCDHB6-201ENST00000231136 3266 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 SLC8B1-213ENST00000552014 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 CXorf40B-203ENST00000370406 1653 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 AL365181.1-201ENST00000564032 1828 ntBASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 TTC16-201ENST00000373289 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 MKX-202ENST00000419761 3638 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 DGKH-203ENST00000379274 4202 ntTSL 2 BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 RN7SKP255-201ENST00000363442 313 ntBASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 RN7SKP203-201ENST00000363618 332 ntBASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 RN7SKP71-201ENST00000364558 318 ntBASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 7SK.1-201ENST00000365328 331 ntBASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 CTPS1-202ENST00000372621 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 AP000356.3-201ENST00000382243 753 ntBASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 AC026316.1-201ENST00000398900 414 ntBASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 FAM183BP-201ENST00000409072 1595 ntBASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms