Protein–RNA interactions for Protein: F8W1W9

NPIPB9, Nuclear pore complex-interacting protein family member B9, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB9F8W1W9 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC11.87□□□□□ -0.51
NPIPB9F8W1W9 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB9F8W1W9 DFFB-201ENST00000338895 3105 ntTSL 2 BASIC11.87□□□□□ -0.51
NPIPB9F8W1W9 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB9F8W1W9 CCDC112-201ENST00000379611 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB9F8W1W9 AC243964.3-201ENST00000623022 2028 ntBASIC11.87□□□□□ -0.51
NPIPB9F8W1W9 NUB1-212ENST00000568733 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB9F8W1W9 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB9F8W1W9 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB9F8W1W9 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC11.87□□□□□ -0.51
NPIPB9F8W1W9 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
NPIPB9F8W1W9 SHANK2-AS3-201ENST00000307548 1683 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB9F8W1W9 AC009549.1-201ENST00000603468 1686 ntBASIC11.87□□□□□ -0.51
NPIPB9F8W1W9 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
NPIPB9F8W1W9 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB9F8W1W9 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC11.87□□□□□ -0.51
NPIPB9F8W1W9 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
NPIPB9F8W1W9 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB9F8W1W9 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC11.87□□□□□ -0.51
NPIPB9F8W1W9 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC11.87□□□□□ -0.51
NPIPB9F8W1W9 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 AC099521.2-201ENST00000619354 2036 ntBASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 ABCC4-207ENST00000629385 2903 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 CR769775.1-203ENST00000399894 579 ntTSL 3 BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 PSMD4P1-201ENST00000433951 1109 ntBASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 COL18A1-AS2-201ENST00000446475 552 ntTSL 4 BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 AC024293.1-201ENST00000467930 498 ntBASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 AC026470.1-201ENST00000478038 846 ntBASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 OARD1-214ENST00000486443 764 ntTSL 3 BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 AC104117.1-201ENST00000517817 900 ntBASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 WASIR2-201ENST00000527434 1054 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 MIR4746-201ENST00000579802 71 ntBASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 AC100793.3-201ENST00000592440 719 ntTSL 2 BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 APOC1-209ENST00000592885 562 ntTSL 3 BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 FXYD3-212ENST00000605550 590 ntTSL 4 BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 AC007450.4-201ENST00000614709 524 ntBASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 AL135960.1-201ENST00000422216 4036 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 AC016831.5-201ENST00000605249 1998 ntBASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 DCLRE1C-208ENST00000378258 2463 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 ELP4-225ENST00000640533 1801 ntTSL 5 BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 AL133464.1-205ENST00000634595 1535 ntTSL 5 BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB9F8W1W9 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPB9F8W1W9 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPB9F8W1W9 C10orf90-201ENST00000284694 3076 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPB9F8W1W9 PARGP1-201ENST00000417555 2286 ntBASIC11.85□□□□□ -0.51
NPIPB9F8W1W9 IRF5-208ENST00000473745 2282 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
NPIPB9F8W1W9 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPB9F8W1W9 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPB9F8W1W9 AL590428.1-201ENST00000428865 1973 ntTSL 2 BASIC11.85□□□□□ -0.51
NPIPB9F8W1W9 PER1-202ENST00000354903 3115 ntTSL 2 BASIC11.85□□□□□ -0.51
NPIPB9F8W1W9 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPB9F8W1W9 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPB9F8W1W9 HOPX-211ENST00000554144 1672 ntTSL 5 BASIC11.85□□□□□ -0.51
NPIPB9F8W1W9 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPB9F8W1W9 CHI3L2-201ENST00000369744 1489 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
NPIPB9F8W1W9 CTAGE7P-201ENST00000435712 2436 ntBASIC11.85□□□□□ -0.51
NPIPB9F8W1W9 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms