Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
MTHFRP42898 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MTHFRP42898 SDR16C5-203ENST00000522671 1988 ntTSL 2 BASIC13.63□□□□□ -0.23
MTHFRP42898 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
MTHFRP42898 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
MTHFRP42898 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
MTHFRP42898 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.63□□□□□ -0.23
MTHFRP42898 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
MTHFRP42898 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.63□□□□□ -0.23
MTHFRP42898 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MTHFRP42898 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
MTHFRP42898 KIR2DL4-204ENST00000359085 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
MTHFRP42898 POM121L14P-201ENST00000406100 1558 ntBASIC13.63□□□□□ -0.23
MTHFRP42898 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
MTHFRP42898 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.63□□□□□ -0.23
MTHFRP42898 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
MTHFRP42898 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MTHFRP42898 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
MTHFRP42898 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MTHFRP42898 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
MTHFRP42898 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MTHFRP42898 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
MTHFRP42898 AGAP12P-201ENST00000585227 2359 ntBASIC13.63□□□□□ -0.23
MTHFRP42898 PXK-210ENST00000479241 2817 ntTSL 2 BASIC13.63□□□□□ -0.23
MTHFRP42898 ANAPC15-201ENST00000227618 886 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
MTHFRP42898 PRY-201ENST00000303728 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MTHFRP42898 PRY2-201ENST00000303804 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MTHFRP42898 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC13.63□□□□□ -0.23
MTHFRP42898 PRYP3-201ENST00000343584 1063 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MTHFRP42898 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC13.63□□□□□ -0.23
MTHFRP42898 OBP2A-203ENST00000371776 689 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MTHFRP42898 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
MTHFRP42898 OAZ3-202ENST00000400999 890 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
MTHFRP42898 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MTHFRP42898 HNRNPA1P59-201ENST00000430583 918 ntBASIC13.63□□□□□ -0.23
MTHFRP42898 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC13.63□□□□□ -0.23
MTHFRP42898 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC13.63□□□□□ -0.23
MTHFRP42898 AL669831.4-201ENST00000447500 872 ntTSL 5 BASIC13.63□□□□□ -0.23
MTHFRP42898 TGFA-207ENST00000450929 950 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MTHFRP42898 EEF1GP1-201ENST00000457231 1299 ntBASIC13.63□□□□□ -0.23
MTHFRP42898 AL355987.2-201ENST00000471502 561 ntTSL 4 BASIC13.63□□□□□ -0.23
MTHFRP42898 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC13.63□□□□□ -0.23
MTHFRP42898 BBOX1-AS1-203ENST00000530430 879 ntTSL 4 BASIC13.63□□□□□ -0.23
MTHFRP42898 BBOX1-AS1-204ENST00000531363 745 ntTSL 2 BASIC13.63□□□□□ -0.23
MTHFRP42898 NEMF-210ENST00000556672 590 ntTSL 2 BASIC13.63□□□□□ -0.23
MTHFRP42898 AC018868.2-201ENST00000559655 1259 ntBASIC13.63□□□□□ -0.23
MTHFRP42898 AC009132.1-201ENST00000565194 320 ntBASIC13.63□□□□□ -0.23
MTHFRP42898 PMM2-216ENST00000569958 698 ntTSL 2 BASIC13.63□□□□□ -0.23
MTHFRP42898 CALM3-206ENST00000594523 540 ntTSL 4 BASIC13.63□□□□□ -0.23
MTHFRP42898 AC009779.7-201ENST00000609031 469 ntBASIC13.63□□□□□ -0.23
MTHFRP42898 IL4R-219ENST00000628578 201 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MTHFRP42898 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
MTHFRP42898 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
MTHFRP42898 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
MTHFRP42898 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MTHFRP42898 OLFML1-204ENST00000530135 1620 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
MTHFRP42898 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MTHFRP42898 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MTHFRP42898 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
MTHFRP42898 POM121L4P-202ENST00000427789 1891 ntBASIC13.63□□□□□ -0.23
MTHFRP42898 AC004554.2-201ENST00000634846 1893 ntTSL 5 BASIC13.63□□□□□ -0.23
MTHFRP42898 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MTHFRP42898 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MTHFRP42898 LILRB4-205ENST00000430952 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
MTHFRP42898 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MTHFRP42898 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC13.63□□□□□ -0.23
MTHFRP42898 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.63□□□□□ -0.23
MTHFRP42898 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MTHFRP42898 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC13.63□□□□□ -0.23
MTHFRP42898 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
MTHFRP42898 C3orf36-201ENST00000408895 1668 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
MTHFRP42898 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MTHFRP42898 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MTHFRP42898 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MTHFRP42898 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
MTHFRP42898 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.62□□□□□ -0.23
MTHFRP42898 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MTHFRP42898 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.62□□□□□ -0.23
MTHFRP42898 TP73-203ENST00000357733 4899 ntTSL 5 BASIC13.62□□□□□ -0.23
MTHFRP42898 CDCA7L-202ENST00000373934 1830 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
MTHFRP42898 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MTHFRP42898 SLC26A5-201ENST00000306312 2689 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
MTHFRP42898 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MTHFRP42898 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MTHFRP42898 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MTHFRP42898 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MTHFRP42898 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MTHFRP42898 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.62□□□□□ -0.23
MTHFRP42898 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MTHFRP42898 AC000078.1-201ENST00000420617 682 ntBASIC13.62□□□□□ -0.23
MTHFRP42898 AC159540.1-201ENST00000422600 555 ntTSL 4 BASIC13.62□□□□□ -0.23
MTHFRP42898 TRGV2-201ENST00000426402 544 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
MTHFRP42898 AL161644.1-201ENST00000426901 1111 ntTSL 2 BASIC13.62□□□□□ -0.23
MTHFRP42898 CDCA4P3-201ENST00000442572 689 ntBASIC13.62□□□□□ -0.23
MTHFRP42898 OR52X1P-201ENST00000446117 914 ntBASIC13.62□□□□□ -0.23
MTHFRP42898 HNRNPA1P9-201ENST00000450624 950 ntBASIC13.62□□□□□ -0.23
MTHFRP42898 CHCHD2P6-201ENST00000454346 447 ntBASIC13.62□□□□□ -0.23
MTHFRP42898 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC13.62□□□□□ -0.23
MTHFRP42898 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MTHFRP42898 SELENOK-205ENST00000541726 814 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms