Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 C17orf82-201ENST00000623772 1530 ntBASIC21.53■■□□□ 1.04
PCDHGA4Q9Y5G9 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
PCDHGA4Q9Y5G9 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGA4Q9Y5G9 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGA4Q9Y5G9 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGA4Q9Y5G9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHGA4Q9Y5G9 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.52■■□□□ 1.04
PCDHGA4Q9Y5G9 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHGA4Q9Y5G9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.52■■□□□ 1.04
PCDHGA4Q9Y5G9 IRS3P-201ENST00000223076 1006 ntBASIC21.52■■□□□ 1.04
PCDHGA4Q9Y5G9 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHGA4Q9Y5G9 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHGA4Q9Y5G9 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.52■■□□□ 1.04
PCDHGA4Q9Y5G9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.52■■□□□ 1.04
PCDHGA4Q9Y5G9 AL138724.1-201ENST00000606771 1088 ntBASIC21.52■■□□□ 1.04
PCDHGA4Q9Y5G9 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
PCDHGA4Q9Y5G9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PCDHGA4Q9Y5G9 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.52■■□□□ 1.03
PCDHGA4Q9Y5G9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PCDHGA4Q9Y5G9 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGA4Q9Y5G9 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
PCDHGA4Q9Y5G9 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGA4Q9Y5G9 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDHGA4Q9Y5G9 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDHGA4Q9Y5G9 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.51■■□□□ 1.03
PCDHGA4Q9Y5G9 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGA4Q9Y5G9 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGA4Q9Y5G9 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
PCDHGA4Q9Y5G9 ANOS2P-203ENST00000472227 1816 ntBASIC21.5■■□□□ 1.03
PCDHGA4Q9Y5G9 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGA4Q9Y5G9 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHGA4Q9Y5G9 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGA4Q9Y5G9 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGA4Q9Y5G9 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDHGA4Q9Y5G9 AC099791.1-201ENST00000416440 715 ntBASIC21.5■■□□□ 1.03
PCDHGA4Q9Y5G9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHGA4Q9Y5G9 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.5■■□□□ 1.03
PCDHGA4Q9Y5G9 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.5■■□□□ 1.03
PCDHGA4Q9Y5G9 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGA4Q9Y5G9 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGA4Q9Y5G9 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDHGA4Q9Y5G9 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDHGA4Q9Y5G9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGA4Q9Y5G9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGA4Q9Y5G9 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDHGA4Q9Y5G9 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGA4Q9Y5G9 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
PCDHGA4Q9Y5G9 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGA4Q9Y5G9 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.49■■□□□ 1.03
PCDHGA4Q9Y5G9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDHGA4Q9Y5G9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.49■■□□□ 1.03
PCDHGA4Q9Y5G9 AC079630.1-202ENST00000618127 1840 ntBASIC21.49■■□□□ 1.03
PCDHGA4Q9Y5G9 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGA4Q9Y5G9 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDHGA4Q9Y5G9 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGA4Q9Y5G9 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGA4Q9Y5G9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
PCDHGA4Q9Y5G9 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDHGA4Q9Y5G9 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA4Q9Y5G9 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA4Q9Y5G9 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDHGA4Q9Y5G9 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA4Q9Y5G9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDHGA4Q9Y5G9 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDHGA4Q9Y5G9 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDHGA4Q9Y5G9 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA4Q9Y5G9 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDHGA4Q9Y5G9 AC144652.1-201ENST00000609974 1624 ntBASIC21.47■■□□□ 1.03
PCDHGA4Q9Y5G9 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGA4Q9Y5G9 AC092068.2-201ENST00000590491 1708 ntBASIC21.47■■□□□ 1.03
PCDHGA4Q9Y5G9 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDHGA4Q9Y5G9 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHGA4Q9Y5G9 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGA4Q9Y5G9 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
PCDHGA4Q9Y5G9 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGA4Q9Y5G9 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGA4Q9Y5G9 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGA4Q9Y5G9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGA4Q9Y5G9 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDHGA4Q9Y5G9 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGA4Q9Y5G9 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGA4Q9Y5G9 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGA4Q9Y5G9 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGA4Q9Y5G9 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.46■■□□□ 1.03
PCDHGA4Q9Y5G9 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGA4Q9Y5G9 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGA4Q9Y5G9 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDHGA4Q9Y5G9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.45■■□□□ 1.02
PCDHGA4Q9Y5G9 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGA4Q9Y5G9 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDHGA4Q9Y5G9 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.45■■□□□ 1.02
PCDHGA4Q9Y5G9 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGA4Q9Y5G9 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PCDHGA4Q9Y5G9 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGA4Q9Y5G9 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDHGA4Q9Y5G9 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
PCDHGA4Q9Y5G9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGA4Q9Y5G9 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDHGA4Q9Y5G9 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGA4Q9Y5G9 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 509.5 ms