Protein–RNA interactions for Protein: Q9Y5E4

PCDHB5, Protocadherin beta-5, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5Q9Y5E4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHB5Q9Y5E4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.21■■□□□ 1.31
PCDHB5Q9Y5E4 AC010141.3-201ENST00000456659 717 ntBASIC23.21■■□□□ 1.31
PCDHB5Q9Y5E4 AL162430.1-201ENST00000480705 870 ntBASIC23.21■■□□□ 1.31
PCDHB5Q9Y5E4 AC104564.3-201ENST00000582367 638 ntBASIC23.21■■□□□ 1.31
PCDHB5Q9Y5E4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.21■■□□□ 1.31
PCDHB5Q9Y5E4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.21■■□□□ 1.31
PCDHB5Q9Y5E4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDHB5Q9Y5E4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.21■■□□□ 1.31
PCDHB5Q9Y5E4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHB5Q9Y5E4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.21■■□□□ 1.31
PCDHB5Q9Y5E4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
PCDHB5Q9Y5E4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDHB5Q9Y5E4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHB5Q9Y5E4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHB5Q9Y5E4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHB5Q9Y5E4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.2■■□□□ 1.3
PCDHB5Q9Y5E4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.2■■□□□ 1.3
PCDHB5Q9Y5E4 AC034268.1-201ENST00000441047 882 ntBASIC23.2■■□□□ 1.3
PCDHB5Q9Y5E4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.2■■□□□ 1.3
PCDHB5Q9Y5E4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.2■■□□□ 1.3
PCDHB5Q9Y5E4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.2■■□□□ 1.3
PCDHB5Q9Y5E4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHB5Q9Y5E4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHB5Q9Y5E4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB5Q9Y5E4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHB5Q9Y5E4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB5Q9Y5E4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB5Q9Y5E4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB5Q9Y5E4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB5Q9Y5E4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.19■■□□□ 1.3
PCDHB5Q9Y5E4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDHB5Q9Y5E4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB5Q9Y5E4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB5Q9Y5E4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.19■■□□□ 1.3
PCDHB5Q9Y5E4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB5Q9Y5E4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB5Q9Y5E4 AC092666.2-201ENST00000613287 246 ntBASIC23.19■■□□□ 1.3
PCDHB5Q9Y5E4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDHB5Q9Y5E4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB5Q9Y5E4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB5Q9Y5E4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB5Q9Y5E4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB5Q9Y5E4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.18■■□□□ 1.3
PCDHB5Q9Y5E4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHB5Q9Y5E4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB5Q9Y5E4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB5Q9Y5E4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
PCDHB5Q9Y5E4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
PCDHB5Q9Y5E4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.18■■□□□ 1.3
PCDHB5Q9Y5E4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB5Q9Y5E4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
PCDHB5Q9Y5E4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
PCDHB5Q9Y5E4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
PCDHB5Q9Y5E4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.18■■□□□ 1.3
PCDHB5Q9Y5E4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB5Q9Y5E4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB5Q9Y5E4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB5Q9Y5E4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB5Q9Y5E4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB5Q9Y5E4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
PCDHB5Q9Y5E4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB5Q9Y5E4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB5Q9Y5E4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB5Q9Y5E4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
PCDHB5Q9Y5E4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB5Q9Y5E4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB5Q9Y5E4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB5Q9Y5E4 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.17■■□□□ 1.3
PCDHB5Q9Y5E4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.17■■□□□ 1.3
PCDHB5Q9Y5E4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.17■■□□□ 1.3
PCDHB5Q9Y5E4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.17■■□□□ 1.3
PCDHB5Q9Y5E4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.17■■□□□ 1.3
PCDHB5Q9Y5E4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB5Q9Y5E4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.17■■□□□ 1.3
PCDHB5Q9Y5E4 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB5Q9Y5E4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB5Q9Y5E4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.16■■□□□ 1.3
PCDHB5Q9Y5E4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB5Q9Y5E4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB5Q9Y5E4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.16■■□□□ 1.3
PCDHB5Q9Y5E4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.16■■□□□ 1.3
PCDHB5Q9Y5E4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB5Q9Y5E4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB5Q9Y5E4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB5Q9Y5E4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.15■■□□□ 1.3
PCDHB5Q9Y5E4 DUSP8P3-201ENST00000399571 1760 ntBASIC23.15■■□□□ 1.3
PCDHB5Q9Y5E4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.15■■□□□ 1.3
PCDHB5Q9Y5E4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB5Q9Y5E4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB5Q9Y5E4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB5Q9Y5E4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.15■■□□□ 1.3
PCDHB5Q9Y5E4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB5Q9Y5E4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.14■■□□□ 1.3
PCDHB5Q9Y5E4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHB5Q9Y5E4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHB5Q9Y5E4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDHB5Q9Y5E4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.14■■□□□ 1.29
PCDHB5Q9Y5E4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.14■■□□□ 1.29
PCDHB5Q9Y5E4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms