Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.58■□□□□ 0.72
SSR3Q9UNL2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SSR3Q9UNL2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.58■□□□□ 0.72
SSR3Q9UNL2 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.58■□□□□ 0.72
SSR3Q9UNL2 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSR3Q9UNL2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSR3Q9UNL2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SSR3Q9UNL2 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SSR3Q9UNL2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.58■□□□□ 0.72
SSR3Q9UNL2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SSR3Q9UNL2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR3Q9UNL2 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR3Q9UNL2 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR3Q9UNL2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SSR3Q9UNL2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR3Q9UNL2 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR3Q9UNL2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.57■□□□□ 0.72
SSR3Q9UNL2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR3Q9UNL2 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SSR3Q9UNL2 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR3Q9UNL2 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SSR3Q9UNL2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.57■□□□□ 0.72
SSR3Q9UNL2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR3Q9UNL2 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SSR3Q9UNL2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR3Q9UNL2 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.57■□□□□ 0.72
SSR3Q9UNL2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SSR3Q9UNL2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSR3Q9UNL2 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SSR3Q9UNL2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSR3Q9UNL2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SSR3Q9UNL2 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSR3Q9UNL2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SSR3Q9UNL2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.56■□□□□ 0.72
SSR3Q9UNL2 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SSR3Q9UNL2 AL121603.2-201ENST00000557373 2117 ntBASIC19.56■□□□□ 0.72
SSR3Q9UNL2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSR3Q9UNL2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.56■□□□□ 0.72
SSR3Q9UNL2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSR3Q9UNL2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.56■□□□□ 0.72
SSR3Q9UNL2 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSR3Q9UNL2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SSR3Q9UNL2 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSR3Q9UNL2 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SSR3Q9UNL2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.55■□□□□ 0.72
SSR3Q9UNL2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SSR3Q9UNL2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSR3Q9UNL2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SSR3Q9UNL2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSR3Q9UNL2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSR3Q9UNL2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SSR3Q9UNL2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SSR3Q9UNL2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.54■□□□□ 0.72
SSR3Q9UNL2 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.54■□□□□ 0.72
SSR3Q9UNL2 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.54■□□□□ 0.72
SSR3Q9UNL2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.54■□□□□ 0.72
SSR3Q9UNL2 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSR3Q9UNL2 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.54■□□□□ 0.72
SSR3Q9UNL2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.54■□□□□ 0.72
SSR3Q9UNL2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.54■□□□□ 0.72
SSR3Q9UNL2 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SSR3Q9UNL2 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SSR3Q9UNL2 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SSR3Q9UNL2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SSR3Q9UNL2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SSR3Q9UNL2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SSR3Q9UNL2 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
SSR3Q9UNL2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSR3Q9UNL2 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.54■□□□□ 0.72
SSR3Q9UNL2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.54■□□□□ 0.72
SSR3Q9UNL2 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SSR3Q9UNL2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.53■□□□□ 0.72
SSR3Q9UNL2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SSR3Q9UNL2 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SSR3Q9UNL2 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SSR3Q9UNL2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSR3Q9UNL2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.53■□□□□ 0.72
SSR3Q9UNL2 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SSR3Q9UNL2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSR3Q9UNL2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSR3Q9UNL2 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSR3Q9UNL2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SSR3Q9UNL2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SSR3Q9UNL2 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SSR3Q9UNL2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSR3Q9UNL2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SSR3Q9UNL2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SSR3Q9UNL2 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSR3Q9UNL2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.52■□□□□ 0.72
SSR3Q9UNL2 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.52■□□□□ 0.72
SSR3Q9UNL2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
SSR3Q9UNL2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
SSR3Q9UNL2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
SSR3Q9UNL2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSR3Q9UNL2 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SSR3Q9UNL2 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.51■□□□□ 0.71
SSR3Q9UNL2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSR3Q9UNL2 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSR3Q9UNL2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSR3Q9UNL2 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms