Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
HPF1Q9NWY4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HPF1Q9NWY4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HPF1Q9NWY4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HPF1Q9NWY4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
HPF1Q9NWY4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.32■□□□□ 0.84
HPF1Q9NWY4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
HPF1Q9NWY4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
HPF1Q9NWY4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
HPF1Q9NWY4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HPF1Q9NWY4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HPF1Q9NWY4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HPF1Q9NWY4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.32■□□□□ 0.84
HPF1Q9NWY4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
HPF1Q9NWY4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HPF1Q9NWY4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HPF1Q9NWY4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HPF1Q9NWY4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.32■□□□□ 0.84
HPF1Q9NWY4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
HPF1Q9NWY4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HPF1Q9NWY4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
HPF1Q9NWY4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HPF1Q9NWY4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HPF1Q9NWY4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HPF1Q9NWY4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.31■□□□□ 0.84
HPF1Q9NWY4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HPF1Q9NWY4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.31■□□□□ 0.84
HPF1Q9NWY4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HPF1Q9NWY4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
HPF1Q9NWY4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.31■□□□□ 0.84
HPF1Q9NWY4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HPF1Q9NWY4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HPF1Q9NWY4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.3■□□□□ 0.84
HPF1Q9NWY4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
HPF1Q9NWY4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
HPF1Q9NWY4 IGHV3-19-201ENST00000521488 291 ntBASIC20.3■□□□□ 0.84
HPF1Q9NWY4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.3■□□□□ 0.84
HPF1Q9NWY4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.3■□□□□ 0.84
HPF1Q9NWY4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HPF1Q9NWY4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
HPF1Q9NWY4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HPF1Q9NWY4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.3■□□□□ 0.84
HPF1Q9NWY4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.3■□□□□ 0.84
HPF1Q9NWY4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HPF1Q9NWY4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPF1Q9NWY4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HPF1Q9NWY4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.29■□□□□ 0.84
HPF1Q9NWY4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
HPF1Q9NWY4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPF1Q9NWY4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.29■□□□□ 0.84
HPF1Q9NWY4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
HPF1Q9NWY4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
HPF1Q9NWY4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.29■□□□□ 0.84
HPF1Q9NWY4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
HPF1Q9NWY4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
HPF1Q9NWY4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPF1Q9NWY4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.29■□□□□ 0.84
HPF1Q9NWY4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
HPF1Q9NWY4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
HPF1Q9NWY4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPF1Q9NWY4 AC092068.2-201ENST00000590491 1708 ntBASIC20.29■□□□□ 0.84
HPF1Q9NWY4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.29■□□□□ 0.84
HPF1Q9NWY4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPF1Q9NWY4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPF1Q9NWY4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.28■□□□□ 0.84
HPF1Q9NWY4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HPF1Q9NWY4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HPF1Q9NWY4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
HPF1Q9NWY4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HPF1Q9NWY4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HPF1Q9NWY4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.28■□□□□ 0.84
HPF1Q9NWY4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HPF1Q9NWY4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HPF1Q9NWY4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
HPF1Q9NWY4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.27■□□□□ 0.84
HPF1Q9NWY4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
HPF1Q9NWY4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HPF1Q9NWY4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
HPF1Q9NWY4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
HPF1Q9NWY4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
HPF1Q9NWY4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.27■□□□□ 0.84
HPF1Q9NWY4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HPF1Q9NWY4 AP005435.1-201ENST00000529293 1178 ntBASIC20.27■□□□□ 0.84
HPF1Q9NWY4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.27■□□□□ 0.84
HPF1Q9NWY4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.27■□□□□ 0.84
HPF1Q9NWY4 RARRES2P6-201ENST00000567333 442 ntBASIC20.27■□□□□ 0.84
HPF1Q9NWY4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HPF1Q9NWY4 AC079834.2-201ENST00000609776 1949 ntBASIC20.27■□□□□ 0.84
HPF1Q9NWY4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
HPF1Q9NWY4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
HPF1Q9NWY4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HPF1Q9NWY4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
HPF1Q9NWY4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HPF1Q9NWY4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HPF1Q9NWY4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HPF1Q9NWY4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HPF1Q9NWY4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
HPF1Q9NWY4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HPF1Q9NWY4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HPF1Q9NWY4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms