Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMCO4Q9NRQ5 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMCO4Q9NRQ5 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMCO4Q9NRQ5 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMCO4Q9NRQ5 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC17.31■□□□□ 0.36
SMCO4Q9NRQ5 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
SMCO4Q9NRQ5 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMCO4Q9NRQ5 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMCO4Q9NRQ5 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMCO4Q9NRQ5 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
SMCO4Q9NRQ5 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.31■□□□□ 0.36
SMCO4Q9NRQ5 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.31■□□□□ 0.36
SMCO4Q9NRQ5 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC17.31■□□□□ 0.36
SMCO4Q9NRQ5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMCO4Q9NRQ5 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMCO4Q9NRQ5 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.3■□□□□ 0.36
SMCO4Q9NRQ5 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.3■□□□□ 0.36
SMCO4Q9NRQ5 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMCO4Q9NRQ5 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMCO4Q9NRQ5 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMCO4Q9NRQ5 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMCO4Q9NRQ5 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
SMCO4Q9NRQ5 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SMCO4Q9NRQ5 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMCO4Q9NRQ5 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMCO4Q9NRQ5 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMCO4Q9NRQ5 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.3■□□□□ 0.36
SMCO4Q9NRQ5 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.3■□□□□ 0.36
SMCO4Q9NRQ5 LINC01006-201ENST00000333319 2292 ntBASIC17.3■□□□□ 0.36
SMCO4Q9NRQ5 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
SMCO4Q9NRQ5 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SMCO4Q9NRQ5 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMCO4Q9NRQ5 AC087289.5-201ENST00000586076 3175 ntBASIC17.29■□□□□ 0.36
SMCO4Q9NRQ5 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMCO4Q9NRQ5 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC17.29■□□□□ 0.36
SMCO4Q9NRQ5 AP002365.1-201ENST00000603448 772 ntBASIC17.29■□□□□ 0.36
SMCO4Q9NRQ5 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMCO4Q9NRQ5 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC17.29■□□□□ 0.36
SMCO4Q9NRQ5 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC17.29■□□□□ 0.36
SMCO4Q9NRQ5 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.29■□□□□ 0.36
SMCO4Q9NRQ5 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMCO4Q9NRQ5 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.29■□□□□ 0.36
SMCO4Q9NRQ5 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SMCO4Q9NRQ5 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMCO4Q9NRQ5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMCO4Q9NRQ5 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMCO4Q9NRQ5 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.29■□□□□ 0.36
SMCO4Q9NRQ5 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
SMCO4Q9NRQ5 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMCO4Q9NRQ5 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMCO4Q9NRQ5 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SMCO4Q9NRQ5 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SMCO4Q9NRQ5 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
SMCO4Q9NRQ5 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMCO4Q9NRQ5 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMCO4Q9NRQ5 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.28■□□□□ 0.36
SMCO4Q9NRQ5 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.28■□□□□ 0.36
SMCO4Q9NRQ5 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.28■□□□□ 0.36
SMCO4Q9NRQ5 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SMCO4Q9NRQ5 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMCO4Q9NRQ5 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SMCO4Q9NRQ5 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMCO4Q9NRQ5 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
SMCO4Q9NRQ5 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMCO4Q9NRQ5 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMCO4Q9NRQ5 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMCO4Q9NRQ5 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMCO4Q9NRQ5 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.27■□□□□ 0.36
SMCO4Q9NRQ5 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.27■□□□□ 0.36
SMCO4Q9NRQ5 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.27■□□□□ 0.36
SMCO4Q9NRQ5 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.27■□□□□ 0.36
SMCO4Q9NRQ5 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.27■□□□□ 0.36
SMCO4Q9NRQ5 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMCO4Q9NRQ5 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
SMCO4Q9NRQ5 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.27■□□□□ 0.36
SMCO4Q9NRQ5 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMCO4Q9NRQ5 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SMCO4Q9NRQ5 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SMCO4Q9NRQ5 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.26■□□□□ 0.35
SMCO4Q9NRQ5 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMCO4Q9NRQ5 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SMCO4Q9NRQ5 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.26■□□□□ 0.35
SMCO4Q9NRQ5 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMCO4Q9NRQ5 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMCO4Q9NRQ5 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.26■□□□□ 0.35
SMCO4Q9NRQ5 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SMCO4Q9NRQ5 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC17.26■□□□□ 0.35
SMCO4Q9NRQ5 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMCO4Q9NRQ5 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SMCO4Q9NRQ5 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.26■□□□□ 0.35
SMCO4Q9NRQ5 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMCO4Q9NRQ5 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMCO4Q9NRQ5 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SMCO4Q9NRQ5 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMCO4Q9NRQ5 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMCO4Q9NRQ5 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SMCO4Q9NRQ5 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SMCO4Q9NRQ5 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMCO4Q9NRQ5 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMCO4Q9NRQ5 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms