Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KLHL1Q9NR64 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KLHL1Q9NR64 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
KLHL1Q9NR64 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.56■□□□□ 0.88
KLHL1Q9NR64 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KLHL1Q9NR64 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KLHL1Q9NR64 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KLHL1Q9NR64 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.56■□□□□ 0.88
KLHL1Q9NR64 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
KLHL1Q9NR64 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KLHL1Q9NR64 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
KLHL1Q9NR64 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.56■□□□□ 0.88
KLHL1Q9NR64 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
KLHL1Q9NR64 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
KLHL1Q9NR64 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KLHL1Q9NR64 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KLHL1Q9NR64 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KLHL1Q9NR64 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
KLHL1Q9NR64 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.55■□□□□ 0.88
KLHL1Q9NR64 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KLHL1Q9NR64 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KLHL1Q9NR64 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KLHL1Q9NR64 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KLHL1Q9NR64 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
KLHL1Q9NR64 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.54■□□□□ 0.88
KLHL1Q9NR64 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KLHL1Q9NR64 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.54■□□□□ 0.88
KLHL1Q9NR64 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
KLHL1Q9NR64 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.54■□□□□ 0.88
KLHL1Q9NR64 AC026271.2-201ENST00000428091 497 ntBASIC20.54■□□□□ 0.88
KLHL1Q9NR64 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.54■□□□□ 0.88
KLHL1Q9NR64 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KLHL1Q9NR64 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KLHL1Q9NR64 AC233992.3-201ENST00000607491 485 ntBASIC20.54■□□□□ 0.88
KLHL1Q9NR64 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KLHL1Q9NR64 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
KLHL1Q9NR64 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KLHL1Q9NR64 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
KLHL1Q9NR64 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KLHL1Q9NR64 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
KLHL1Q9NR64 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.53■□□□□ 0.88
KLHL1Q9NR64 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KLHL1Q9NR64 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
KLHL1Q9NR64 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KLHL1Q9NR64 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.53■□□□□ 0.88
KLHL1Q9NR64 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.53■□□□□ 0.88
KLHL1Q9NR64 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.53■□□□□ 0.88
KLHL1Q9NR64 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.53■□□□□ 0.88
KLHL1Q9NR64 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KLHL1Q9NR64 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
KLHL1Q9NR64 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
KLHL1Q9NR64 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
KLHL1Q9NR64 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.53■□□□□ 0.88
KLHL1Q9NR64 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KLHL1Q9NR64 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.53■□□□□ 0.88
KLHL1Q9NR64 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.53■□□□□ 0.88
KLHL1Q9NR64 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
KLHL1Q9NR64 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KLHL1Q9NR64 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
KLHL1Q9NR64 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KLHL1Q9NR64 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
KLHL1Q9NR64 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KLHL1Q9NR64 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KLHL1Q9NR64 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
KLHL1Q9NR64 BX842568.3-201ENST00000418104 571 ntBASIC20.52■□□□□ 0.88
KLHL1Q9NR64 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.52■□□□□ 0.88
KLHL1Q9NR64 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
KLHL1Q9NR64 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KLHL1Q9NR64 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
KLHL1Q9NR64 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KLHL1Q9NR64 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
KLHL1Q9NR64 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
KLHL1Q9NR64 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.52■□□□□ 0.87
KLHL1Q9NR64 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.52■□□□□ 0.87
KLHL1Q9NR64 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
KLHL1Q9NR64 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.51■□□□□ 0.87
KLHL1Q9NR64 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KLHL1Q9NR64 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KLHL1Q9NR64 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KLHL1Q9NR64 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.51■□□□□ 0.87
KLHL1Q9NR64 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KLHL1Q9NR64 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KLHL1Q9NR64 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.51■□□□□ 0.87
KLHL1Q9NR64 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
KLHL1Q9NR64 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KLHL1Q9NR64 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KLHL1Q9NR64 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
KLHL1Q9NR64 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KLHL1Q9NR64 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
KLHL1Q9NR64 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KLHL1Q9NR64 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.5■□□□□ 0.87
KLHL1Q9NR64 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KLHL1Q9NR64 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KLHL1Q9NR64 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.5■□□□□ 0.87
KLHL1Q9NR64 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.5■□□□□ 0.87
KLHL1Q9NR64 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KLHL1Q9NR64 AC126544.1-201ENST00000580842 1059 ntBASIC20.5■□□□□ 0.87
KLHL1Q9NR64 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
KLHL1Q9NR64 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KLHL1Q9NR64 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms