Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
BBS4Q96RK4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BBS4Q96RK4 GUSBP5-202ENST00000510805 1989 ntBASIC20.78■□□□□ 0.92
BBS4Q96RK4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
BBS4Q96RK4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.78■□□□□ 0.92
BBS4Q96RK4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BBS4Q96RK4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.78■□□□□ 0.92
BBS4Q96RK4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.78■□□□□ 0.92
BBS4Q96RK4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.78■□□□□ 0.92
BBS4Q96RK4 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.78■□□□□ 0.92
BBS4Q96RK4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.78■□□□□ 0.92
BBS4Q96RK4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
BBS4Q96RK4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BBS4Q96RK4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
BBS4Q96RK4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BBS4Q96RK4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
BBS4Q96RK4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.78■□□□□ 0.92
BBS4Q96RK4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BBS4Q96RK4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
BBS4Q96RK4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BBS4Q96RK4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
BBS4Q96RK4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BBS4Q96RK4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
BBS4Q96RK4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BBS4Q96RK4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BBS4Q96RK4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.77■□□□□ 0.92
BBS4Q96RK4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.77■□□□□ 0.92
BBS4Q96RK4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.77■□□□□ 0.92
BBS4Q96RK4 AC099791.2-201ENST00000605725 427 ntBASIC20.77■□□□□ 0.92
BBS4Q96RK4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
BBS4Q96RK4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BBS4Q96RK4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
BBS4Q96RK4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
BBS4Q96RK4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
BBS4Q96RK4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
BBS4Q96RK4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
BBS4Q96RK4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BBS4Q96RK4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
BBS4Q96RK4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.76■□□□□ 0.91
BBS4Q96RK4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.76■□□□□ 0.91
BBS4Q96RK4 AL499627.2-201ENST00000606283 725 ntBASIC20.76■□□□□ 0.91
BBS4Q96RK4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
BBS4Q96RK4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.76■□□□□ 0.91
BBS4Q96RK4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BBS4Q96RK4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
BBS4Q96RK4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.76■□□□□ 0.91
BBS4Q96RK4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BBS4Q96RK4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BBS4Q96RK4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BBS4Q96RK4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BBS4Q96RK4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
BBS4Q96RK4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.75■□□□□ 0.91
BBS4Q96RK4 AC006455.2-201ENST00000429931 906 ntBASIC20.75■□□□□ 0.91
BBS4Q96RK4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.75■□□□□ 0.91
BBS4Q96RK4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.75■□□□□ 0.91
BBS4Q96RK4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.75■□□□□ 0.91
BBS4Q96RK4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.75■□□□□ 0.91
BBS4Q96RK4 AL512631.2-201ENST00000604634 923 ntBASIC20.75■□□□□ 0.91
BBS4Q96RK4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.75■□□□□ 0.91
BBS4Q96RK4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
BBS4Q96RK4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BBS4Q96RK4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BBS4Q96RK4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BBS4Q96RK4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BBS4Q96RK4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BBS4Q96RK4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
BBS4Q96RK4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BBS4Q96RK4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
BBS4Q96RK4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BBS4Q96RK4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BBS4Q96RK4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
BBS4Q96RK4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.74■□□□□ 0.91
BBS4Q96RK4 pRNA.6-201ENST00000610482 90 ntBASIC20.74■□□□□ 0.91
BBS4Q96RK4 pRNA.5-201ENST00000612139 90 ntBASIC20.74■□□□□ 0.91
BBS4Q96RK4 pRNA.11-201ENST00000618423 90 ntBASIC20.74■□□□□ 0.91
BBS4Q96RK4 pRNA.13-201ENST00000619112 90 ntBASIC20.74■□□□□ 0.91
BBS4Q96RK4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
BBS4Q96RK4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
BBS4Q96RK4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BBS4Q96RK4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BBS4Q96RK4 LINC01960-201ENST00000563759 1884 ntBASIC20.73■□□□□ 0.91
BBS4Q96RK4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.73■□□□□ 0.91
BBS4Q96RK4 AC127496.7-201ENST00000625110 1798 ntBASIC20.73■□□□□ 0.91
BBS4Q96RK4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BBS4Q96RK4 AC092171.4-201ENST00000609130 632 ntBASIC20.73■□□□□ 0.91
BBS4Q96RK4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.73■□□□□ 0.91
BBS4Q96RK4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
BBS4Q96RK4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
BBS4Q96RK4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
BBS4Q96RK4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
BBS4Q96RK4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.73■□□□□ 0.91
BBS4Q96RK4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BBS4Q96RK4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BBS4Q96RK4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.72■□□□□ 0.91
BBS4Q96RK4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BBS4Q96RK4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BBS4Q96RK4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BBS4Q96RK4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BBS4Q96RK4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
BBS4Q96RK4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms