Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
PDLIM5Q96HC4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDLIM5Q96HC4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDLIM5Q96HC4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDLIM5Q96HC4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.54■■□□□ 1.04
PDLIM5Q96HC4 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.54■■□□□ 1.04
PDLIM5Q96HC4 pRNA.6-201ENST00000610482 90 ntBASIC21.54■■□□□ 1.04
PDLIM5Q96HC4 pRNA.5-201ENST00000612139 90 ntBASIC21.54■■□□□ 1.04
PDLIM5Q96HC4 pRNA.11-201ENST00000618423 90 ntBASIC21.54■■□□□ 1.04
PDLIM5Q96HC4 pRNA.13-201ENST00000619112 90 ntBASIC21.54■■□□□ 1.04
PDLIM5Q96HC4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDLIM5Q96HC4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PDLIM5Q96HC4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
PDLIM5Q96HC4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.53■■□□□ 1.04
PDLIM5Q96HC4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.53■■□□□ 1.04
PDLIM5Q96HC4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDLIM5Q96HC4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.53■■□□□ 1.04
PDLIM5Q96HC4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDLIM5Q96HC4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.53■■□□□ 1.04
PDLIM5Q96HC4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDLIM5Q96HC4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
PDLIM5Q96HC4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.53■■□□□ 1.04
PDLIM5Q96HC4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDLIM5Q96HC4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.52■■□□□ 1.04
PDLIM5Q96HC4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PDLIM5Q96HC4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDLIM5Q96HC4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.52■■□□□ 1.04
PDLIM5Q96HC4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PDLIM5Q96HC4 MIR3181-201ENST00000578512 73 ntBASIC21.52■■□□□ 1.04
PDLIM5Q96HC4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDLIM5Q96HC4 AC137767.1-201ENST00000602918 1920 ntBASIC21.52■■□□□ 1.04
PDLIM5Q96HC4 AC092053.2-201ENST00000640557 1818 ntBASIC21.52■■□□□ 1.04
PDLIM5Q96HC4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDLIM5Q96HC4 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDLIM5Q96HC4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDLIM5Q96HC4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
PDLIM5Q96HC4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDLIM5Q96HC4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PDLIM5Q96HC4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDLIM5Q96HC4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.51■■□□□ 1.03
PDLIM5Q96HC4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PDLIM5Q96HC4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDLIM5Q96HC4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDLIM5Q96HC4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDLIM5Q96HC4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.5■■□□□ 1.03
PDLIM5Q96HC4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDLIM5Q96HC4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDLIM5Q96HC4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.5■■□□□ 1.03
PDLIM5Q96HC4 AL031602.1-201ENST00000633169 911 ntBASIC21.5■■□□□ 1.03
PDLIM5Q96HC4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.5■■□□□ 1.03
PDLIM5Q96HC4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDLIM5Q96HC4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDLIM5Q96HC4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDLIM5Q96HC4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.49■■□□□ 1.03
PDLIM5Q96HC4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
PDLIM5Q96HC4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDLIM5Q96HC4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.49■■□□□ 1.03
PDLIM5Q96HC4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDLIM5Q96HC4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PDLIM5Q96HC4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PDLIM5Q96HC4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PDLIM5Q96HC4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.49■■□□□ 1.03
PDLIM5Q96HC4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.49■■□□□ 1.03
PDLIM5Q96HC4 MIR4466-201ENST00000606121 54 ntBASIC21.49■■□□□ 1.03
PDLIM5Q96HC4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.49■■□□□ 1.03
PDLIM5Q96HC4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PDLIM5Q96HC4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.49■■□□□ 1.03
PDLIM5Q96HC4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDLIM5Q96HC4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PDLIM5Q96HC4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.49■■□□□ 1.03
PDLIM5Q96HC4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PDLIM5Q96HC4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDLIM5Q96HC4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.48■■□□□ 1.03
PDLIM5Q96HC4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDLIM5Q96HC4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDLIM5Q96HC4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDLIM5Q96HC4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
PDLIM5Q96HC4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.48■■□□□ 1.03
PDLIM5Q96HC4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
PDLIM5Q96HC4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PDLIM5Q96HC4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.48■■□□□ 1.03
PDLIM5Q96HC4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDLIM5Q96HC4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDLIM5Q96HC4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDLIM5Q96HC4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDLIM5Q96HC4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PDLIM5Q96HC4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
PDLIM5Q96HC4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDLIM5Q96HC4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDLIM5Q96HC4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDLIM5Q96HC4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PDLIM5Q96HC4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PDLIM5Q96HC4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
PDLIM5Q96HC4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.48■■□□□ 1.03
PDLIM5Q96HC4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDLIM5Q96HC4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.47■■□□□ 1.03
PDLIM5Q96HC4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDLIM5Q96HC4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.47■■□□□ 1.03
PDLIM5Q96HC4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.47■■□□□ 1.03
PDLIM5Q96HC4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms