Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.66■□□□□ 0.9
TM9SF4Q92544 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.66■□□□□ 0.9
TM9SF4Q92544 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.66■□□□□ 0.9
TM9SF4Q92544 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TM9SF4Q92544 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TM9SF4Q92544 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TM9SF4Q92544 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TM9SF4Q92544 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
TM9SF4Q92544 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.65■□□□□ 0.9
TM9SF4Q92544 YBX1P1-201ENST00000445822 960 ntBASIC20.65■□□□□ 0.9
TM9SF4Q92544 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.65■□□□□ 0.9
TM9SF4Q92544 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.65■□□□□ 0.9
TM9SF4Q92544 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.65■□□□□ 0.9
TM9SF4Q92544 AL358852.1-201ENST00000623174 1268 ntBASIC20.65■□□□□ 0.9
TM9SF4Q92544 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.65■□□□□ 0.9
TM9SF4Q92544 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.64■□□□□ 0.9
TM9SF4Q92544 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
TM9SF4Q92544 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.64■□□□□ 0.89
TM9SF4Q92544 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
TM9SF4Q92544 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TM9SF4Q92544 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
TM9SF4Q92544 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.64■□□□□ 0.89
TM9SF4Q92544 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.64■□□□□ 0.89
TM9SF4Q92544 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.64■□□□□ 0.89
TM9SF4Q92544 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TM9SF4Q92544 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TM9SF4Q92544 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
TM9SF4Q92544 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TM9SF4Q92544 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
TM9SF4Q92544 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TM9SF4Q92544 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TM9SF4Q92544 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.63■□□□□ 0.89
TM9SF4Q92544 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.63■□□□□ 0.89
TM9SF4Q92544 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TM9SF4Q92544 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
TM9SF4Q92544 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.63■□□□□ 0.89
TM9SF4Q92544 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.63■□□□□ 0.89
TM9SF4Q92544 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TM9SF4Q92544 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.63■□□□□ 0.89
TM9SF4Q92544 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TM9SF4Q92544 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.63■□□□□ 0.89
TM9SF4Q92544 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TM9SF4Q92544 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.62■□□□□ 0.89
TM9SF4Q92544 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TM9SF4Q92544 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.62■□□□□ 0.89
TM9SF4Q92544 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TM9SF4Q92544 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TM9SF4Q92544 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.62■□□□□ 0.89
TM9SF4Q92544 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TM9SF4Q92544 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TM9SF4Q92544 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TM9SF4Q92544 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
TM9SF4Q92544 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.62■□□□□ 0.89
TM9SF4Q92544 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TM9SF4Q92544 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
TM9SF4Q92544 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TM9SF4Q92544 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TM9SF4Q92544 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TM9SF4Q92544 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TM9SF4Q92544 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TM9SF4Q92544 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.61■□□□□ 0.89
TM9SF4Q92544 SLC47A1P1-202ENST00000449666 945 ntBASIC20.61■□□□□ 0.89
TM9SF4Q92544 IGHV3-19-201ENST00000521488 291 ntBASIC20.61■□□□□ 0.89
TM9SF4Q92544 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TM9SF4Q92544 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.61■□□□□ 0.89
TM9SF4Q92544 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.61■□□□□ 0.89
TM9SF4Q92544 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.61■□□□□ 0.89
TM9SF4Q92544 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.61■□□□□ 0.89
TM9SF4Q92544 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TM9SF4Q92544 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TM9SF4Q92544 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TM9SF4Q92544 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.61■□□□□ 0.89
TM9SF4Q92544 EP400NL-214ENST00000641289 2402 ntBASIC20.61■□□□□ 0.89
TM9SF4Q92544 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TM9SF4Q92544 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TM9SF4Q92544 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TM9SF4Q92544 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TM9SF4Q92544 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TM9SF4Q92544 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TM9SF4Q92544 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.6■□□□□ 0.89
TM9SF4Q92544 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TM9SF4Q92544 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.6■□□□□ 0.89
TM9SF4Q92544 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
TM9SF4Q92544 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.6■□□□□ 0.89
TM9SF4Q92544 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.6■□□□□ 0.89
TM9SF4Q92544 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TM9SF4Q92544 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TM9SF4Q92544 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TM9SF4Q92544 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TM9SF4Q92544 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TM9SF4Q92544 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TM9SF4Q92544 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TM9SF4Q92544 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TM9SF4Q92544 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TM9SF4Q92544 AC233723.2-201ENST00000623798 2106 ntBASIC20.59■□□□□ 0.89
TM9SF4Q92544 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
TM9SF4Q92544 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TM9SF4Q92544 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TM9SF4Q92544 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
TM9SF4Q92544 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms