Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
RNF139Q8WU17 AC068473.5-201ENST00000616428 2072 ntBASIC23.08■■□□□ 1.29
RNF139Q8WU17 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.07■■□□□ 1.28
RNF139Q8WU17 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RNF139Q8WU17 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
RNF139Q8WU17 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.07■■□□□ 1.28
RNF139Q8WU17 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
RNF139Q8WU17 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RNF139Q8WU17 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
RNF139Q8WU17 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.06■■□□□ 1.28
RNF139Q8WU17 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RNF139Q8WU17 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RNF139Q8WU17 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RNF139Q8WU17 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
RNF139Q8WU17 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
RNF139Q8WU17 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF139Q8WU17 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF139Q8WU17 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.05■■□□□ 1.28
RNF139Q8WU17 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF139Q8WU17 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.05■■□□□ 1.28
RNF139Q8WU17 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.05■■□□□ 1.28
RNF139Q8WU17 AC010525.1-201ENST00000585559 441 ntBASIC23.05■■□□□ 1.28
RNF139Q8WU17 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.05■■□□□ 1.28
RNF139Q8WU17 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF139Q8WU17 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF139Q8WU17 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF139Q8WU17 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RNF139Q8WU17 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RNF139Q8WU17 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.04■■□□□ 1.28
RNF139Q8WU17 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RNF139Q8WU17 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF139Q8WU17 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.04■■□□□ 1.28
RNF139Q8WU17 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF139Q8WU17 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
RNF139Q8WU17 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
RNF139Q8WU17 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RNF139Q8WU17 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF139Q8WU17 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
RNF139Q8WU17 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.04■■□□□ 1.28
RNF139Q8WU17 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.04■■□□□ 1.28
RNF139Q8WU17 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
RNF139Q8WU17 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
RNF139Q8WU17 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.04■■□□□ 1.28
RNF139Q8WU17 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.03■■□□□ 1.28
RNF139Q8WU17 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF139Q8WU17 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF139Q8WU17 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF139Q8WU17 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.03■■□□□ 1.28
RNF139Q8WU17 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF139Q8WU17 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.03■■□□□ 1.28
RNF139Q8WU17 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF139Q8WU17 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF139Q8WU17 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF139Q8WU17 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNF139Q8WU17 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNF139Q8WU17 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
RNF139Q8WU17 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.02■■□□□ 1.28
RNF139Q8WU17 AC105265.2-201ENST00000467189 838 ntBASIC23.02■■□□□ 1.28
RNF139Q8WU17 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
RNF139Q8WU17 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
RNF139Q8WU17 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RNF139Q8WU17 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RNF139Q8WU17 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNF139Q8WU17 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.02■■□□□ 1.28
RNF139Q8WU17 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.01■■□□□ 1.27
RNF139Q8WU17 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
RNF139Q8WU17 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF139Q8WU17 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
RNF139Q8WU17 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF139Q8WU17 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF139Q8WU17 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF139Q8WU17 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.01■■□□□ 1.27
RNF139Q8WU17 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF139Q8WU17 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF139Q8WU17 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF139Q8WU17 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
RNF139Q8WU17 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23■■□□□ 1.27
RNF139Q8WU17 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
RNF139Q8WU17 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
RNF139Q8WU17 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
RNF139Q8WU17 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23■■□□□ 1.27
RNF139Q8WU17 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23■■□□□ 1.27
RNF139Q8WU17 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23■■□□□ 1.27
RNF139Q8WU17 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23■■□□□ 1.27
RNF139Q8WU17 AC133561.1-201ENST00000568600 2415 ntBASIC23■■□□□ 1.27
RNF139Q8WU17 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23■■□□□ 1.27
RNF139Q8WU17 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
RNF139Q8WU17 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23■■□□□ 1.27
RNF139Q8WU17 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
RNF139Q8WU17 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
RNF139Q8WU17 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.99■■□□□ 1.27
RNF139Q8WU17 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
RNF139Q8WU17 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.99■■□□□ 1.27
RNF139Q8WU17 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
RNF139Q8WU17 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.99■■□□□ 1.27
RNF139Q8WU17 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.99■■□□□ 1.27
RNF139Q8WU17 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22.99■■□□□ 1.27
RNF139Q8WU17 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
RNF139Q8WU17 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
RNF139Q8WU17 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms