Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.69■■□□□ 1.06
RFWD2Q8NHY2 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFWD2Q8NHY2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFWD2Q8NHY2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFWD2Q8NHY2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFWD2Q8NHY2 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RFWD2Q8NHY2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFWD2Q8NHY2 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RFWD2Q8NHY2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.68■■□□□ 1.06
RFWD2Q8NHY2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFWD2Q8NHY2 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFWD2Q8NHY2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
RFWD2Q8NHY2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
RFWD2Q8NHY2 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFWD2Q8NHY2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RFWD2Q8NHY2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
RFWD2Q8NHY2 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFWD2Q8NHY2 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RFWD2Q8NHY2 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RFWD2Q8NHY2 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.67■■□□□ 1.06
RFWD2Q8NHY2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.67■■□□□ 1.06
RFWD2Q8NHY2 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RFWD2Q8NHY2 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFWD2Q8NHY2 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.67■■□□□ 1.06
RFWD2Q8NHY2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RFWD2Q8NHY2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RFWD2Q8NHY2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.66■■□□□ 1.06
RFWD2Q8NHY2 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFWD2Q8NHY2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFWD2Q8NHY2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
RFWD2Q8NHY2 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFWD2Q8NHY2 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.66■■□□□ 1.06
RFWD2Q8NHY2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFWD2Q8NHY2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
RFWD2Q8NHY2 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RFWD2Q8NHY2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RFWD2Q8NHY2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RFWD2Q8NHY2 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RFWD2Q8NHY2 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.65■■□□□ 1.06
RFWD2Q8NHY2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RFWD2Q8NHY2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFWD2Q8NHY2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFWD2Q8NHY2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.65■■□□□ 1.06
RFWD2Q8NHY2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RFWD2Q8NHY2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RFWD2Q8NHY2 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
RFWD2Q8NHY2 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.64■■□□□ 1.05
RFWD2Q8NHY2 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.64■■□□□ 1.05
RFWD2Q8NHY2 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RFWD2Q8NHY2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RFWD2Q8NHY2 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.64■■□□□ 1.05
RFWD2Q8NHY2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RFWD2Q8NHY2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.64■■□□□ 1.05
RFWD2Q8NHY2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RFWD2Q8NHY2 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFWD2Q8NHY2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
RFWD2Q8NHY2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.63■■□□□ 1.05
RFWD2Q8NHY2 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFWD2Q8NHY2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RFWD2Q8NHY2 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFWD2Q8NHY2 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.63■■□□□ 1.05
RFWD2Q8NHY2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RFWD2Q8NHY2 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.63■■□□□ 1.05
RFWD2Q8NHY2 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFWD2Q8NHY2 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.63■■□□□ 1.05
RFWD2Q8NHY2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFWD2Q8NHY2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.62■■□□□ 1.05
RFWD2Q8NHY2 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFWD2Q8NHY2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.62■■□□□ 1.05
RFWD2Q8NHY2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFWD2Q8NHY2 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFWD2Q8NHY2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
RFWD2Q8NHY2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFWD2Q8NHY2 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
RFWD2Q8NHY2 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFWD2Q8NHY2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
RFWD2Q8NHY2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
RFWD2Q8NHY2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
RFWD2Q8NHY2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFWD2Q8NHY2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RFWD2Q8NHY2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFWD2Q8NHY2 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFWD2Q8NHY2 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFWD2Q8NHY2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.61■■□□□ 1.05
RFWD2Q8NHY2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
RFWD2Q8NHY2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFWD2Q8NHY2 AC004987.1-201ENST00000428627 508 ntBASIC21.61■■□□□ 1.05
RFWD2Q8NHY2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.61■■□□□ 1.05
RFWD2Q8NHY2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFWD2Q8NHY2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFWD2Q8NHY2 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
RFWD2Q8NHY2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFWD2Q8NHY2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.6■■□□□ 1.05
RFWD2Q8NHY2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFWD2Q8NHY2 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.6■■□□□ 1.05
RFWD2Q8NHY2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFWD2Q8NHY2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFWD2Q8NHY2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RFWD2Q8NHY2 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFWD2Q8NHY2 AC139795.1-202ENST00000500444 432 ntBASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms