Protein–RNA interactions for Protein: Q8ND25

ZNRF1, E3 ubiquitin-protein ligase ZNRF1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF1Q8ND25 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNRF1Q8ND25 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.37■□□□□ 0.53
ZNRF1Q8ND25 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNRF1Q8ND25 AL136162.1-201ENST00000607711 1078 ntBASIC18.37■□□□□ 0.53
ZNRF1Q8ND25 AC011298.3-201ENST00000615796 283 ntBASIC18.37■□□□□ 0.53
ZNRF1Q8ND25 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ZNRF1Q8ND25 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.37■□□□□ 0.53
ZNRF1Q8ND25 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.37■□□□□ 0.53
ZNRF1Q8ND25 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNRF1Q8ND25 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNRF1Q8ND25 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNRF1Q8ND25 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ZNRF1Q8ND25 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNRF1Q8ND25 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNRF1Q8ND25 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNRF1Q8ND25 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ZNRF1Q8ND25 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ZNRF1Q8ND25 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
ZNRF1Q8ND25 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNRF1Q8ND25 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.36■□□□□ 0.53
ZNRF1Q8ND25 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ZNRF1Q8ND25 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNRF1Q8ND25 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNRF1Q8ND25 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.36■□□□□ 0.53
ZNRF1Q8ND25 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.36■□□□□ 0.53
ZNRF1Q8ND25 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNRF1Q8ND25 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNRF1Q8ND25 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ZNRF1Q8ND25 AC233723.2-201ENST00000623798 2106 ntBASIC18.35■□□□□ 0.53
ZNRF1Q8ND25 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.35■□□□□ 0.53
ZNRF1Q8ND25 LINC01960-201ENST00000563759 1884 ntBASIC18.35■□□□□ 0.53
ZNRF1Q8ND25 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNRF1Q8ND25 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNRF1Q8ND25 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
ZNRF1Q8ND25 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
ZNRF1Q8ND25 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
ZNRF1Q8ND25 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNRF1Q8ND25 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNRF1Q8ND25 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNRF1Q8ND25 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNRF1Q8ND25 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.35■□□□□ 0.53
ZNRF1Q8ND25 AC024257.2-201ENST00000549699 147 ntBASIC18.35■□□□□ 0.53
ZNRF1Q8ND25 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNRF1Q8ND25 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNRF1Q8ND25 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNRF1Q8ND25 AC136469.2-201ENST00000623944 1028 ntBASIC18.35■□□□□ 0.53
ZNRF1Q8ND25 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNRF1Q8ND25 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ZNRF1Q8ND25 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNRF1Q8ND25 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNRF1Q8ND25 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNRF1Q8ND25 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNRF1Q8ND25 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNRF1Q8ND25 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNRF1Q8ND25 AC135279.3-201ENST00000610945 1311 ntBASIC18.34■□□□□ 0.53
ZNRF1Q8ND25 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNRF1Q8ND25 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNRF1Q8ND25 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNRF1Q8ND25 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNRF1Q8ND25 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNRF1Q8ND25 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ZNRF1Q8ND25 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
ZNRF1Q8ND25 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNRF1Q8ND25 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.33■□□□□ 0.53
ZNRF1Q8ND25 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ZNRF1Q8ND25 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZNRF1Q8ND25 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
ZNRF1Q8ND25 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZNRF1Q8ND25 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZNRF1Q8ND25 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.33■□□□□ 0.52
ZNRF1Q8ND25 PBX2P1-201ENST00000493219 1291 ntBASIC18.33■□□□□ 0.52
ZNRF1Q8ND25 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
ZNRF1Q8ND25 AC110285.6-201ENST00000617652 491 ntBASIC18.33■□□□□ 0.52
ZNRF1Q8ND25 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNRF1Q8ND25 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.33■□□□□ 0.52
ZNRF1Q8ND25 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNRF1Q8ND25 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.33■□□□□ 0.52
ZNRF1Q8ND25 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
ZNRF1Q8ND25 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNRF1Q8ND25 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNRF1Q8ND25 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ZNRF1Q8ND25 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNRF1Q8ND25 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.32■□□□□ 0.52
ZNRF1Q8ND25 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ZNRF1Q8ND25 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNRF1Q8ND25 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNRF1Q8ND25 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ZNRF1Q8ND25 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
ZNRF1Q8ND25 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNRF1Q8ND25 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ZNRF1Q8ND25 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.32■□□□□ 0.52
ZNRF1Q8ND25 MIR4767-201ENST00000582827 78 ntBASIC18.32■□□□□ 0.52
ZNRF1Q8ND25 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.32■□□□□ 0.52
ZNRF1Q8ND25 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNRF1Q8ND25 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZNRF1Q8ND25 AC087742.1-201ENST00000575880 1738 ntBASIC18.32■□□□□ 0.52
ZNRF1Q8ND25 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNRF1Q8ND25 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNRF1Q8ND25 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZNRF1Q8ND25 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms