Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRTM2Q8N967 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC17.95■□□□□ 0.46
LRTM2Q8N967 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRTM2Q8N967 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC17.95■□□□□ 0.46
LRTM2Q8N967 MTX2-204ENST00000443241 799 ntTSL 3 BASIC17.95■□□□□ 0.46
LRTM2Q8N967 MIR4449-201ENST00000578365 66 ntBASIC17.95■□□□□ 0.46
LRTM2Q8N967 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.95■□□□□ 0.46
LRTM2Q8N967 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRTM2Q8N967 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRTM2Q8N967 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
LRTM2Q8N967 HYI-213ENST00000583037 1322 ntTSL 5 BASIC17.95■□□□□ 0.46
LRTM2Q8N967 LINC01529-204ENST00000636474 1715 ntBASIC17.95■□□□□ 0.46
LRTM2Q8N967 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRTM2Q8N967 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.95■□□□□ 0.46
LRTM2Q8N967 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.94■□□□□ 0.46
LRTM2Q8N967 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.94■□□□□ 0.46
LRTM2Q8N967 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LRTM2Q8N967 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRTM2Q8N967 FP325331.1-202ENST00000623531 1380 ntBASIC17.94■□□□□ 0.46
LRTM2Q8N967 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRTM2Q8N967 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRTM2Q8N967 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRTM2Q8N967 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRTM2Q8N967 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRTM2Q8N967 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRTM2Q8N967 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.94■□□□□ 0.46
LRTM2Q8N967 AC120024.1-201ENST00000562672 995 ntBASIC17.94■□□□□ 0.46
LRTM2Q8N967 AC073130.3-201ENST00000624389 2278 ntBASIC17.94■□□□□ 0.46
LRTM2Q8N967 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRTM2Q8N967 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRTM2Q8N967 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.94■□□□□ 0.46
LRTM2Q8N967 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
LRTM2Q8N967 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRTM2Q8N967 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRTM2Q8N967 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRTM2Q8N967 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRTM2Q8N967 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRTM2Q8N967 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRTM2Q8N967 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC17.93■□□□□ 0.46
LRTM2Q8N967 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.93■□□□□ 0.46
LRTM2Q8N967 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRTM2Q8N967 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRTM2Q8N967 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRTM2Q8N967 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
LRTM2Q8N967 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.93■□□□□ 0.46
LRTM2Q8N967 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRTM2Q8N967 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRTM2Q8N967 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRTM2Q8N967 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRTM2Q8N967 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRTM2Q8N967 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRTM2Q8N967 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRTM2Q8N967 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRTM2Q8N967 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.92■□□□□ 0.46
LRTM2Q8N967 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
LRTM2Q8N967 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRTM2Q8N967 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.92■□□□□ 0.46
LRTM2Q8N967 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRTM2Q8N967 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRTM2Q8N967 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.92■□□□□ 0.46
LRTM2Q8N967 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRTM2Q8N967 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRTM2Q8N967 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRTM2Q8N967 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.92■□□□□ 0.46
LRTM2Q8N967 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC17.92■□□□□ 0.46
LRTM2Q8N967 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.92■□□□□ 0.46
LRTM2Q8N967 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC17.92■□□□□ 0.46
LRTM2Q8N967 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC17.92■□□□□ 0.46
LRTM2Q8N967 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
LRTM2Q8N967 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRTM2Q8N967 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRTM2Q8N967 PKD1P6-201ENST00000343738 4769 ntBASIC17.92■□□□□ 0.46
LRTM2Q8N967 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRTM2Q8N967 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.92■□□□□ 0.46
LRTM2Q8N967 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRTM2Q8N967 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRTM2Q8N967 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRTM2Q8N967 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.91■□□□□ 0.46
LRTM2Q8N967 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRTM2Q8N967 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRTM2Q8N967 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
LRTM2Q8N967 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.91■□□□□ 0.46
LRTM2Q8N967 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.91■□□□□ 0.46
LRTM2Q8N967 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRTM2Q8N967 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
LRTM2Q8N967 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRTM2Q8N967 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC17.91■□□□□ 0.46
LRTM2Q8N967 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRTM2Q8N967 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.91■□□□□ 0.46
LRTM2Q8N967 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
LRTM2Q8N967 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LRTM2Q8N967 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.91■□□□□ 0.46
LRTM2Q8N967 MIR4281-201ENST00000580852 62 ntBASIC17.91■□□□□ 0.46
LRTM2Q8N967 CA15P2-201ENST00000611168 834 ntBASIC17.91■□□□□ 0.46
LRTM2Q8N967 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRTM2Q8N967 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRTM2Q8N967 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRTM2Q8N967 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRTM2Q8N967 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRTM2Q8N967 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms