Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAB42Q8N4Z0 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.37■■□□□ 1.01
RAB42Q8N4Z0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.37■■□□□ 1.01
RAB42Q8N4Z0 AL355001.2-201ENST00000620617 1191 ntBASIC21.37■■□□□ 1.01
RAB42Q8N4Z0 AC068587.7-201ENST00000641602 218 ntBASIC21.37■■□□□ 1.01
RAB42Q8N4Z0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.37■■□□□ 1.01
RAB42Q8N4Z0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RAB42Q8N4Z0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.37■■□□□ 1.01
RAB42Q8N4Z0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAB42Q8N4Z0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.36■■□□□ 1.01
RAB42Q8N4Z0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RAB42Q8N4Z0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
RAB42Q8N4Z0 BX842568.3-201ENST00000418104 571 ntBASIC21.36■■□□□ 1.01
RAB42Q8N4Z0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
RAB42Q8N4Z0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAB42Q8N4Z0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.36■■□□□ 1.01
RAB42Q8N4Z0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RAB42Q8N4Z0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
RAB42Q8N4Z0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
RAB42Q8N4Z0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.36■■□□□ 1.01
RAB42Q8N4Z0 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAB42Q8N4Z0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAB42Q8N4Z0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
RAB42Q8N4Z0 PKD1P6-201ENST00000343738 4769 ntBASIC21.36■■□□□ 1.01
RAB42Q8N4Z0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAB42Q8N4Z0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.35■■□□□ 1.01
RAB42Q8N4Z0 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.35■■□□□ 1.01
RAB42Q8N4Z0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RAB42Q8N4Z0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.35■■□□□ 1.01
RAB42Q8N4Z0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RAB42Q8N4Z0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.35■■□□□ 1.01
RAB42Q8N4Z0 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.35■■□□□ 1.01
RAB42Q8N4Z0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RAB42Q8N4Z0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.35■■□□□ 1.01
RAB42Q8N4Z0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RAB42Q8N4Z0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
RAB42Q8N4Z0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.35■■□□□ 1.01
RAB42Q8N4Z0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RAB42Q8N4Z0 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
RAB42Q8N4Z0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
RAB42Q8N4Z0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAB42Q8N4Z0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.34■■□□□ 1.01
RAB42Q8N4Z0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.34■■□□□ 1.01
RAB42Q8N4Z0 AC087239.1-201ENST00000622671 572 ntBASIC21.34■■□□□ 1.01
RAB42Q8N4Z0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.34■■□□□ 1.01
RAB42Q8N4Z0 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.34■■□□□ 1.01
RAB42Q8N4Z0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAB42Q8N4Z0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
RAB42Q8N4Z0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAB42Q8N4Z0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
RAB42Q8N4Z0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RAB42Q8N4Z0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.33■■□□□ 1.01
RAB42Q8N4Z0 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.33■■□□□ 1.01
RAB42Q8N4Z0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.33■■□□□ 1.01
RAB42Q8N4Z0 AC027682.1-201ENST00000562846 899 ntBASIC21.33■■□□□ 1.01
RAB42Q8N4Z0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.33■■□□□ 1.01
RAB42Q8N4Z0 AC233992.3-201ENST00000607491 485 ntBASIC21.33■■□□□ 1.01
RAB42Q8N4Z0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RAB42Q8N4Z0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
RAB42Q8N4Z0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RAB42Q8N4Z0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RAB42Q8N4Z0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
RAB42Q8N4Z0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RAB42Q8N4Z0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RAB42Q8N4Z0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.32■■□□□ 1
RAB42Q8N4Z0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.32■■□□□ 1
RAB42Q8N4Z0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RAB42Q8N4Z0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RAB42Q8N4Z0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RAB42Q8N4Z0 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RAB42Q8N4Z0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
RAB42Q8N4Z0 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RAB42Q8N4Z0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RAB42Q8N4Z0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
RAB42Q8N4Z0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.31■■□□□ 1
RAB42Q8N4Z0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.31■■□□□ 1
RAB42Q8N4Z0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.31■■□□□ 1
RAB42Q8N4Z0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.31■■□□□ 1
RAB42Q8N4Z0 SLC47A1P1-202ENST00000449666 945 ntBASIC21.31■■□□□ 1
RAB42Q8N4Z0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.31■■□□□ 1
RAB42Q8N4Z0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.31■■□□□ 1
RAB42Q8N4Z0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.31■■□□□ 1
RAB42Q8N4Z0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RAB42Q8N4Z0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.31■■□□□ 1
RAB42Q8N4Z0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.31■■□□□ 1
RAB42Q8N4Z0 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAB42Q8N4Z0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAB42Q8N4Z0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAB42Q8N4Z0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
RAB42Q8N4Z0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.3■■□□□ 1
RAB42Q8N4Z0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.3■■□□□ 1
RAB42Q8N4Z0 AC126544.1-201ENST00000580842 1059 ntBASIC21.3■■□□□ 1
RAB42Q8N4Z0 AC008764.7-201ENST00000593779 1081 ntBASIC21.3■■□□□ 1
RAB42Q8N4Z0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAB42Q8N4Z0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAB42Q8N4Z0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.3■■□□□ 1
RAB42Q8N4Z0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAB42Q8N4Z0 LINC01960-201ENST00000563759 1884 ntBASIC21.3■■□□□ 1
RAB42Q8N4Z0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAB42Q8N4Z0 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms