Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
HIST3H2BBQ8N257 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST3H2BBQ8N257 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HIST3H2BBQ8N257 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HIST3H2BBQ8N257 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST3H2BBQ8N257 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HIST3H2BBQ8N257 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST3H2BBQ8N257 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HIST3H2BBQ8N257 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
HIST3H2BBQ8N257 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HIST3H2BBQ8N257 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC16.52■□□□□ 0.24
HIST3H2BBQ8N257 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC16.52■□□□□ 0.24
HIST3H2BBQ8N257 AFG3L1P-217ENST00000557444 2447 ntBASIC16.52■□□□□ 0.24
HIST3H2BBQ8N257 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
HIST3H2BBQ8N257 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
HIST3H2BBQ8N257 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
HIST3H2BBQ8N257 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HIST3H2BBQ8N257 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HIST3H2BBQ8N257 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
HIST3H2BBQ8N257 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HIST3H2BBQ8N257 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HIST3H2BBQ8N257 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
HIST3H2BBQ8N257 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HIST3H2BBQ8N257 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HIST3H2BBQ8N257 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HIST3H2BBQ8N257 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST3H2BBQ8N257 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST3H2BBQ8N257 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST3H2BBQ8N257 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST3H2BBQ8N257 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST3H2BBQ8N257 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST3H2BBQ8N257 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST3H2BBQ8N257 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST3H2BBQ8N257 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HIST3H2BBQ8N257 AC244015.2-201ENST00000616358 1861 ntBASIC16.51■□□□□ 0.23
HIST3H2BBQ8N257 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC16.51■□□□□ 0.23
HIST3H2BBQ8N257 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST3H2BBQ8N257 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST3H2BBQ8N257 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HIST3H2BBQ8N257 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HIST3H2BBQ8N257 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST3H2BBQ8N257 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
HIST3H2BBQ8N257 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
HIST3H2BBQ8N257 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIST3H2BBQ8N257 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.5■□□□□ 0.23
HIST3H2BBQ8N257 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
HIST3H2BBQ8N257 FEM1AP1-201ENST00000431297 1995 ntBASIC16.5■□□□□ 0.23
HIST3H2BBQ8N257 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.5■□□□□ 0.23
HIST3H2BBQ8N257 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HIST3H2BBQ8N257 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIST3H2BBQ8N257 AC018445.3-201ENST00000624177 1945 ntBASIC16.5■□□□□ 0.23
HIST3H2BBQ8N257 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIST3H2BBQ8N257 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIST3H2BBQ8N257 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIST3H2BBQ8N257 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST3H2BBQ8N257 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HIST3H2BBQ8N257 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST3H2BBQ8N257 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST3H2BBQ8N257 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HIST3H2BBQ8N257 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC16.49■□□□□ 0.23
HIST3H2BBQ8N257 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HIST3H2BBQ8N257 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST3H2BBQ8N257 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST3H2BBQ8N257 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.49■□□□□ 0.23
HIST3H2BBQ8N257 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HIST3H2BBQ8N257 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST3H2BBQ8N257 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST3H2BBQ8N257 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST3H2BBQ8N257 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
HIST3H2BBQ8N257 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
HIST3H2BBQ8N257 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST3H2BBQ8N257 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HIST3H2BBQ8N257 EI24-213ENST00000618552 1747 ntTSL 5 BASIC16.49■□□□□ 0.23
HIST3H2BBQ8N257 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST3H2BBQ8N257 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HIST3H2BBQ8N257 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST3H2BBQ8N257 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
HIST3H2BBQ8N257 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.48■□□□□ 0.23
HIST3H2BBQ8N257 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HIST3H2BBQ8N257 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HIST3H2BBQ8N257 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
HIST3H2BBQ8N257 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HIST3H2BBQ8N257 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIST3H2BBQ8N257 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
HIST3H2BBQ8N257 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIST3H2BBQ8N257 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST3H2BBQ8N257 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.47■□□□□ 0.23
HIST3H2BBQ8N257 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST3H2BBQ8N257 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST3H2BBQ8N257 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HIST3H2BBQ8N257 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC16.47■□□□□ 0.23
HIST3H2BBQ8N257 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC16.47■□□□□ 0.23
HIST3H2BBQ8N257 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST3H2BBQ8N257 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST3H2BBQ8N257 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST3H2BBQ8N257 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST3H2BBQ8N257 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HIST3H2BBQ8N257 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.47■□□□□ 0.23
HIST3H2BBQ8N257 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST3H2BBQ8N257 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms