Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CROCCP3Q8IVE0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.87■□□□□ 0.77
CROCCP3Q8IVE0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.87■□□□□ 0.77
CROCCP3Q8IVE0 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CROCCP3Q8IVE0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.87■□□□□ 0.77
CROCCP3Q8IVE0 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.87■□□□□ 0.77
CROCCP3Q8IVE0 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.87■□□□□ 0.77
CROCCP3Q8IVE0 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.87■□□□□ 0.77
CROCCP3Q8IVE0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CROCCP3Q8IVE0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CROCCP3Q8IVE0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CROCCP3Q8IVE0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CROCCP3Q8IVE0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CROCCP3Q8IVE0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CROCCP3Q8IVE0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CROCCP3Q8IVE0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CROCCP3Q8IVE0 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.86■□□□□ 0.77
CROCCP3Q8IVE0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.86■□□□□ 0.77
CROCCP3Q8IVE0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.86■□□□□ 0.77
CROCCP3Q8IVE0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CROCCP3Q8IVE0 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CROCCP3Q8IVE0 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CROCCP3Q8IVE0 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
CROCCP3Q8IVE0 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CROCCP3Q8IVE0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
CROCCP3Q8IVE0 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CROCCP3Q8IVE0 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CROCCP3Q8IVE0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CROCCP3Q8IVE0 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CROCCP3Q8IVE0 AL020996.1-203ENST00000536896 2307 ntBASIC19.85■□□□□ 0.77
CROCCP3Q8IVE0 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.85■□□□□ 0.77
CROCCP3Q8IVE0 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CROCCP3Q8IVE0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CROCCP3Q8IVE0 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CROCCP3Q8IVE0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.85■□□□□ 0.77
CROCCP3Q8IVE0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CROCCP3Q8IVE0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.85■□□□□ 0.77
CROCCP3Q8IVE0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.85■□□□□ 0.77
CROCCP3Q8IVE0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CROCCP3Q8IVE0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CROCCP3Q8IVE0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CROCCP3Q8IVE0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.85■□□□□ 0.77
CROCCP3Q8IVE0 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CROCCP3Q8IVE0 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.85■□□□□ 0.77
CROCCP3Q8IVE0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CROCCP3Q8IVE0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.84■□□□□ 0.77
CROCCP3Q8IVE0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CROCCP3Q8IVE0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CROCCP3Q8IVE0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.84■□□□□ 0.77
CROCCP3Q8IVE0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CROCCP3Q8IVE0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CROCCP3Q8IVE0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.84■□□□□ 0.77
CROCCP3Q8IVE0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CROCCP3Q8IVE0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CROCCP3Q8IVE0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CROCCP3Q8IVE0 SMPD5-203ENST00000639008 1464 ntBASIC19.84■□□□□ 0.77
CROCCP3Q8IVE0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
CROCCP3Q8IVE0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CROCCP3Q8IVE0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.84■□□□□ 0.77
CROCCP3Q8IVE0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CROCCP3Q8IVE0 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CROCCP3Q8IVE0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
CROCCP3Q8IVE0 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CROCCP3Q8IVE0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.83■□□□□ 0.77
CROCCP3Q8IVE0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CROCCP3Q8IVE0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CROCCP3Q8IVE0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.83■□□□□ 0.77
CROCCP3Q8IVE0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CROCCP3Q8IVE0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CROCCP3Q8IVE0 AL157400.5-201ENST00000507624 621 ntBASIC19.83■□□□□ 0.77
CROCCP3Q8IVE0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.83■□□□□ 0.77
CROCCP3Q8IVE0 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.83■□□□□ 0.77
CROCCP3Q8IVE0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CROCCP3Q8IVE0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
CROCCP3Q8IVE0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CROCCP3Q8IVE0 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.82■□□□□ 0.76
CROCCP3Q8IVE0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CROCCP3Q8IVE0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CROCCP3Q8IVE0 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CROCCP3Q8IVE0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.82■□□□□ 0.76
CROCCP3Q8IVE0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CROCCP3Q8IVE0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CROCCP3Q8IVE0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.82■□□□□ 0.76
CROCCP3Q8IVE0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.82■□□□□ 0.76
CROCCP3Q8IVE0 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CROCCP3Q8IVE0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.82■□□□□ 0.76
CROCCP3Q8IVE0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.81■□□□□ 0.76
CROCCP3Q8IVE0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.81■□□□□ 0.76
CROCCP3Q8IVE0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CROCCP3Q8IVE0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CROCCP3Q8IVE0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CROCCP3Q8IVE0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CROCCP3Q8IVE0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CROCCP3Q8IVE0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
CROCCP3Q8IVE0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CROCCP3Q8IVE0 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CROCCP3Q8IVE0 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.81■□□□□ 0.76
CROCCP3Q8IVE0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.81■□□□□ 0.76
CROCCP3Q8IVE0 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CROCCP3Q8IVE0 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms