Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24.61■■□□□ 1.53
TRIM50Q86XT4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
TRIM50Q86XT4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC24.61■■□□□ 1.53
TRIM50Q86XT4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC24.61■■□□□ 1.53
TRIM50Q86XT4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC24.61■■□□□ 1.53
TRIM50Q86XT4 AC022517.1-201ENST00000592429 346 ntBASIC24.61■■□□□ 1.53
TRIM50Q86XT4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.61■■□□□ 1.53
TRIM50Q86XT4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.61■■□□□ 1.53
TRIM50Q86XT4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TRIM50Q86XT4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
TRIM50Q86XT4 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC24.6■■□□□ 1.53
TRIM50Q86XT4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC24.6■■□□□ 1.53
TRIM50Q86XT4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.6■■□□□ 1.53
TRIM50Q86XT4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
TRIM50Q86XT4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC24.6■■□□□ 1.53
TRIM50Q86XT4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
TRIM50Q86XT4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
TRIM50Q86XT4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
TRIM50Q86XT4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.6■■□□□ 1.53
TRIM50Q86XT4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC24.6■■□□□ 1.53
TRIM50Q86XT4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC24.6■■□□□ 1.53
TRIM50Q86XT4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TRIM50Q86XT4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TRIM50Q86XT4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
TRIM50Q86XT4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
TRIM50Q86XT4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC24.59■■□□□ 1.53
TRIM50Q86XT4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC24.59■■□□□ 1.53
TRIM50Q86XT4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC24.59■■□□□ 1.53
TRIM50Q86XT4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC24.59■■□□□ 1.53
TRIM50Q86XT4 TERF1P2-201ENST00000583350 1212 ntBASIC24.59■■□□□ 1.53
TRIM50Q86XT4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TRIM50Q86XT4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TRIM50Q86XT4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
TRIM50Q86XT4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC24.59■■□□□ 1.53
TRIM50Q86XT4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TRIM50Q86XT4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.59■■□□□ 1.53
TRIM50Q86XT4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC24.59■■□□□ 1.53
TRIM50Q86XT4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
TRIM50Q86XT4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC24.58■■□□□ 1.53
TRIM50Q86XT4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC24.58■■□□□ 1.53
TRIM50Q86XT4 KRT18P14-201ENST00000534205 1250 ntBASIC24.58■■□□□ 1.53
TRIM50Q86XT4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TRIM50Q86XT4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC24.58■■□□□ 1.52
TRIM50Q86XT4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
TRIM50Q86XT4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
TRIM50Q86XT4 LINC02228-203ENST00000641970 1355 ntBASIC24.57■■□□□ 1.52
TRIM50Q86XT4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
TRIM50Q86XT4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC24.57■■□□□ 1.52
TRIM50Q86XT4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
TRIM50Q86XT4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC24.57■■□□□ 1.52
TRIM50Q86XT4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC24.57■■□□□ 1.52
TRIM50Q86XT4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC24.57■■□□□ 1.52
TRIM50Q86XT4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC24.57■■□□□ 1.52
TRIM50Q86XT4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TRIM50Q86XT4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TRIM50Q86XT4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
TRIM50Q86XT4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC24.57■■□□□ 1.52
TRIM50Q86XT4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC24.57■■□□□ 1.52
TRIM50Q86XT4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
TRIM50Q86XT4 ANOS2P-203ENST00000472227 1816 ntBASIC24.56■■□□□ 1.52
TRIM50Q86XT4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TRIM50Q86XT4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TRIM50Q86XT4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC24.56■■□□□ 1.52
TRIM50Q86XT4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TRIM50Q86XT4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
TRIM50Q86XT4 AC092437.1-201ENST00000624794 1048 ntBASIC24.56■■□□□ 1.52
TRIM50Q86XT4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TRIM50Q86XT4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC24.56■■□□□ 1.52
TRIM50Q86XT4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
TRIM50Q86XT4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TRIM50Q86XT4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TRIM50Q86XT4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
TRIM50Q86XT4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC24.55■■□□□ 1.52
TRIM50Q86XT4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
TRIM50Q86XT4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC24.55■■□□□ 1.52
TRIM50Q86XT4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC24.55■■□□□ 1.52
TRIM50Q86XT4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC24.55■■□□□ 1.52
TRIM50Q86XT4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
TRIM50Q86XT4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
TRIM50Q86XT4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.55■■□□□ 1.52
TRIM50Q86XT4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
TRIM50Q86XT4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.55■■□□□ 1.52
TRIM50Q86XT4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC24.54■■□□□ 1.52
TRIM50Q86XT4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
TRIM50Q86XT4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TRIM50Q86XT4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC24.54■■□□□ 1.52
TRIM50Q86XT4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TRIM50Q86XT4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TRIM50Q86XT4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
TRIM50Q86XT4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TRIM50Q86XT4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TRIM50Q86XT4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TRIM50Q86XT4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TRIM50Q86XT4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TRIM50Q86XT4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TRIM50Q86XT4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TRIM50Q86XT4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TRIM50Q86XT4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC24.53■■□□□ 1.52
TRIM50Q86XT4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC24.52■■□□□ 1.52
TRIM50Q86XT4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms