Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRFN4Q6PJG9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
LRFN4Q6PJG9 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRFN4Q6PJG9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.67■□□□□ 0.74
LRFN4Q6PJG9 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.67■□□□□ 0.74
LRFN4Q6PJG9 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.67■□□□□ 0.74
LRFN4Q6PJG9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.67■□□□□ 0.74
LRFN4Q6PJG9 AL512631.2-201ENST00000604634 923 ntBASIC19.67■□□□□ 0.74
LRFN4Q6PJG9 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRFN4Q6PJG9 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRFN4Q6PJG9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.67■□□□□ 0.74
LRFN4Q6PJG9 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LRFN4Q6PJG9 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRFN4Q6PJG9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRFN4Q6PJG9 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRFN4Q6PJG9 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
LRFN4Q6PJG9 SLC25A24-204ENST00000569674 2357 ntBASIC19.66■□□□□ 0.74
LRFN4Q6PJG9 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.66■□□□□ 0.74
LRFN4Q6PJG9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRFN4Q6PJG9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.66■□□□□ 0.74
LRFN4Q6PJG9 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRFN4Q6PJG9 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRFN4Q6PJG9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.66■□□□□ 0.74
LRFN4Q6PJG9 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRFN4Q6PJG9 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LRFN4Q6PJG9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.66■□□□□ 0.74
LRFN4Q6PJG9 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRFN4Q6PJG9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRFN4Q6PJG9 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.66■□□□□ 0.74
LRFN4Q6PJG9 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
LRFN4Q6PJG9 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRFN4Q6PJG9 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRFN4Q6PJG9 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.66■□□□□ 0.74
LRFN4Q6PJG9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRFN4Q6PJG9 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRFN4Q6PJG9 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRFN4Q6PJG9 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRFN4Q6PJG9 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.65■□□□□ 0.74
LRFN4Q6PJG9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRFN4Q6PJG9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRFN4Q6PJG9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRFN4Q6PJG9 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.65■□□□□ 0.74
LRFN4Q6PJG9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.65■□□□□ 0.74
LRFN4Q6PJG9 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRFN4Q6PJG9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.65■□□□□ 0.74
LRFN4Q6PJG9 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.65■□□□□ 0.74
LRFN4Q6PJG9 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.65■□□□□ 0.74
LRFN4Q6PJG9 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.64■□□□□ 0.74
LRFN4Q6PJG9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
LRFN4Q6PJG9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
LRFN4Q6PJG9 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRFN4Q6PJG9 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
LRFN4Q6PJG9 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.64■□□□□ 0.73
LRFN4Q6PJG9 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.64■□□□□ 0.73
LRFN4Q6PJG9 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LRFN4Q6PJG9 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRFN4Q6PJG9 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LRFN4Q6PJG9 EP400NL-214ENST00000641289 2402 ntBASIC19.64■□□□□ 0.73
LRFN4Q6PJG9 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRFN4Q6PJG9 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
LRFN4Q6PJG9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.63■□□□□ 0.73
LRFN4Q6PJG9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
LRFN4Q6PJG9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.63■□□□□ 0.73
LRFN4Q6PJG9 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
LRFN4Q6PJG9 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRFN4Q6PJG9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.63■□□□□ 0.73
LRFN4Q6PJG9 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRFN4Q6PJG9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.63■□□□□ 0.73
LRFN4Q6PJG9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.63■□□□□ 0.73
LRFN4Q6PJG9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.63■□□□□ 0.73
LRFN4Q6PJG9 AC241377.3-202ENST00000626088 1088 ntBASIC19.63■□□□□ 0.73
LRFN4Q6PJG9 AC241585.3-202ENST00000628937 1088 ntBASIC19.63■□□□□ 0.73
LRFN4Q6PJG9 AC245100.8-202ENST00000629247 1058 ntBASIC19.63■□□□□ 0.73
LRFN4Q6PJG9 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
LRFN4Q6PJG9 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRFN4Q6PJG9 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.63■□□□□ 0.73
LRFN4Q6PJG9 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRFN4Q6PJG9 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRFN4Q6PJG9 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.62■□□□□ 0.73
LRFN4Q6PJG9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.62■□□□□ 0.73
LRFN4Q6PJG9 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.62■□□□□ 0.73
LRFN4Q6PJG9 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
LRFN4Q6PJG9 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.62■□□□□ 0.73
LRFN4Q6PJG9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRFN4Q6PJG9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.62■□□□□ 0.73
LRFN4Q6PJG9 MIR4466-201ENST00000606121 54 ntBASIC19.62■□□□□ 0.73
LRFN4Q6PJG9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRFN4Q6PJG9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.62■□□□□ 0.73
LRFN4Q6PJG9 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
LRFN4Q6PJG9 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.62■□□□□ 0.73
LRFN4Q6PJG9 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
LRFN4Q6PJG9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.62■□□□□ 0.73
LRFN4Q6PJG9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRFN4Q6PJG9 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
LRFN4Q6PJG9 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRFN4Q6PJG9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRFN4Q6PJG9 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRFN4Q6PJG9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRFN4Q6PJG9 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.61■□□□□ 0.73
LRFN4Q6PJG9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms