Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TMEM88Q6PEY1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TMEM88Q6PEY1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.67■□□□□ 0.42
TMEM88Q6PEY1 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
TMEM88Q6PEY1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM88Q6PEY1 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC17.66■□□□□ 0.42
TMEM88Q6PEY1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM88Q6PEY1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.66■□□□□ 0.42
TMEM88Q6PEY1 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM88Q6PEY1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM88Q6PEY1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.66■□□□□ 0.42
TMEM88Q6PEY1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM88Q6PEY1 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM88Q6PEY1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM88Q6PEY1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM88Q6PEY1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TMEM88Q6PEY1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.66■□□□□ 0.42
TMEM88Q6PEY1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.66■□□□□ 0.42
TMEM88Q6PEY1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
TMEM88Q6PEY1 MIR6089-201ENST00000616698 64 ntBASIC17.66■□□□□ 0.42
TMEM88Q6PEY1 AC022413.1-201ENST00000624602 984 ntBASIC17.66■□□□□ 0.42
TMEM88Q6PEY1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM88Q6PEY1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM88Q6PEY1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM88Q6PEY1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM88Q6PEY1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM88Q6PEY1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TMEM88Q6PEY1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM88Q6PEY1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM88Q6PEY1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC17.65■□□□□ 0.42
TMEM88Q6PEY1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC17.65■□□□□ 0.42
TMEM88Q6PEY1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM88Q6PEY1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM88Q6PEY1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM88Q6PEY1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.65■□□□□ 0.42
TMEM88Q6PEY1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM88Q6PEY1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM88Q6PEY1 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM88Q6PEY1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.65■□□□□ 0.42
TMEM88Q6PEY1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TMEM88Q6PEY1 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM88Q6PEY1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM88Q6PEY1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
TMEM88Q6PEY1 FAM99A-202ENST00000538190 1989 ntBASIC17.64■□□□□ 0.41
TMEM88Q6PEY1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM88Q6PEY1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.64■□□□□ 0.41
TMEM88Q6PEY1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.64■□□□□ 0.41
TMEM88Q6PEY1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.64■□□□□ 0.41
TMEM88Q6PEY1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.64■□□□□ 0.41
TMEM88Q6PEY1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM88Q6PEY1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC17.64■□□□□ 0.41
TMEM88Q6PEY1 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC17.64■□□□□ 0.41
TMEM88Q6PEY1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM88Q6PEY1 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM88Q6PEY1 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM88Q6PEY1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TMEM88Q6PEY1 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TMEM88Q6PEY1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM88Q6PEY1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM88Q6PEY1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TMEM88Q6PEY1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM88Q6PEY1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM88Q6PEY1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM88Q6PEY1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM88Q6PEY1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM88Q6PEY1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.63■□□□□ 0.41
TMEM88Q6PEY1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM88Q6PEY1 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TMEM88Q6PEY1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
TMEM88Q6PEY1 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM88Q6PEY1 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM88Q6PEY1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM88Q6PEY1 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM88Q6PEY1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.63■□□□□ 0.41
TMEM88Q6PEY1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM88Q6PEY1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM88Q6PEY1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM88Q6PEY1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM88Q6PEY1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM88Q6PEY1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM88Q6PEY1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM88Q6PEY1 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM88Q6PEY1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM88Q6PEY1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM88Q6PEY1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM88Q6PEY1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TMEM88Q6PEY1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM88Q6PEY1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC17.62■□□□□ 0.41
TMEM88Q6PEY1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TMEM88Q6PEY1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM88Q6PEY1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM88Q6PEY1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM88Q6PEY1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM88Q6PEY1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM88Q6PEY1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM88Q6PEY1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TMEM88Q6PEY1 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TMEM88Q6PEY1 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TMEM88Q6PEY1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.61■□□□□ 0.41
TMEM88Q6PEY1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms