Protein–RNA interactions for Protein: P68366

TUBA4A, Tubulin alpha-4A chain, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4AP68366 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TUBA4AP68366 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TUBA4AP68366 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TUBA4AP68366 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TUBA4AP68366 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBA4AP68366 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBA4AP68366 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBA4AP68366 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TUBA4AP68366 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBA4AP68366 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
TUBA4AP68366 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBA4AP68366 AC120024.1-201ENST00000562672 995 ntBASIC20.54■□□□□ 0.88
TUBA4AP68366 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBA4AP68366 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.54■□□□□ 0.88
TUBA4AP68366 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
TUBA4AP68366 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TUBA4AP68366 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TUBA4AP68366 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
TUBA4AP68366 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
TUBA4AP68366 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TUBA4AP68366 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBA4AP68366 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBA4AP68366 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.53■□□□□ 0.88
TUBA4AP68366 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.53■□□□□ 0.88
TUBA4AP68366 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TUBA4AP68366 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TUBA4AP68366 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBA4AP68366 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.53■□□□□ 0.88
TUBA4AP68366 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TUBA4AP68366 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
TUBA4AP68366 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBA4AP68366 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBA4AP68366 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TUBA4AP68366 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.53■□□□□ 0.88
TUBA4AP68366 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TUBA4AP68366 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TUBA4AP68366 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TUBA4AP68366 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TUBA4AP68366 THA1P-201ENST00000590384 1145 ntBASIC20.52■□□□□ 0.88
TUBA4AP68366 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TUBA4AP68366 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TUBA4AP68366 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TUBA4AP68366 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.52■□□□□ 0.87
TUBA4AP68366 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
TUBA4AP68366 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TUBA4AP68366 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TUBA4AP68366 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TUBA4AP68366 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TUBA4AP68366 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TUBA4AP68366 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TUBA4AP68366 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TUBA4AP68366 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.51■□□□□ 0.87
TUBA4AP68366 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.5■□□□□ 0.87
TUBA4AP68366 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.5■□□□□ 0.87
TUBA4AP68366 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TUBA4AP68366 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.5■□□□□ 0.87
TUBA4AP68366 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TUBA4AP68366 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TUBA4AP68366 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.5■□□□□ 0.87
TUBA4AP68366 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TUBA4AP68366 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TUBA4AP68366 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.5■□□□□ 0.87
TUBA4AP68366 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TUBA4AP68366 RNF165-205ENST00000588679 2904 ntBASIC20.5■□□□□ 0.87
TUBA4AP68366 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TUBA4AP68366 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TUBA4AP68366 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TUBA4AP68366 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TUBA4AP68366 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.49■□□□□ 0.87
TUBA4AP68366 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TUBA4AP68366 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TUBA4AP68366 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.48■□□□□ 0.87
TUBA4AP68366 AC079630.1-202ENST00000618127 1840 ntBASIC20.48■□□□□ 0.87
TUBA4AP68366 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TUBA4AP68366 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TUBA4AP68366 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.48■□□□□ 0.87
TUBA4AP68366 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.48■□□□□ 0.87
TUBA4AP68366 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TUBA4AP68366 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TUBA4AP68366 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.48■□□□□ 0.87
TUBA4AP68366 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TUBA4AP68366 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TUBA4AP68366 FAM99A-202ENST00000538190 1989 ntBASIC20.48■□□□□ 0.87
TUBA4AP68366 AC080038.3-201ENST00000623346 1952 ntBASIC20.48■□□□□ 0.87
TUBA4AP68366 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TUBA4AP68366 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TUBA4AP68366 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.47■□□□□ 0.87
TUBA4AP68366 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
TUBA4AP68366 AC005229.4-201ENST00000610085 2198 ntBASIC20.47■□□□□ 0.87
TUBA4AP68366 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TUBA4AP68366 KRT18P24-201ENST00000344739 1156 ntBASIC20.47■□□□□ 0.87
TUBA4AP68366 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TUBA4AP68366 AC009299.2-201ENST00000482477 511 ntBASIC20.47■□□□□ 0.87
TUBA4AP68366 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.47■□□□□ 0.87
TUBA4AP68366 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TUBA4AP68366 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.47■□□□□ 0.87
TUBA4AP68366 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.47■□□□□ 0.87
TUBA4AP68366 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TUBA4AP68366 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TUBA4AP68366 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms