Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
VBP1P61758 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.7■□□□□ 0.74
VBP1P61758 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.7■□□□□ 0.74
VBP1P61758 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VBP1P61758 AL353803.4-201ENST00000565882 1934 ntBASIC19.7■□□□□ 0.74
VBP1P61758 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.7■□□□□ 0.74
VBP1P61758 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VBP1P61758 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.7■□□□□ 0.74
VBP1P61758 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VBP1P61758 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VBP1P61758 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.69■□□□□ 0.74
VBP1P61758 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
VBP1P61758 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.69■□□□□ 0.74
VBP1P61758 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
VBP1P61758 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VBP1P61758 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VBP1P61758 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.69■□□□□ 0.74
VBP1P61758 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VBP1P61758 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VBP1P61758 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VBP1P61758 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VBP1P61758 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
VBP1P61758 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
VBP1P61758 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
VBP1P61758 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
VBP1P61758 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.68■□□□□ 0.74
VBP1P61758 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VBP1P61758 RP9P-202ENST00000450133 1212 ntBASIC19.68■□□□□ 0.74
VBP1P61758 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VBP1P61758 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VBP1P61758 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VBP1P61758 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VBP1P61758 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
VBP1P61758 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VBP1P61758 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VBP1P61758 AL391422.3-201ENST00000603791 2761 ntBASIC19.67■□□□□ 0.74
VBP1P61758 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VBP1P61758 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
VBP1P61758 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.67■□□□□ 0.74
VBP1P61758 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VBP1P61758 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.67■□□□□ 0.74
VBP1P61758 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VBP1P61758 AC093536.1-201ENST00000569153 554 ntBASIC19.67■□□□□ 0.74
VBP1P61758 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.67■□□□□ 0.74
VBP1P61758 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VBP1P61758 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VBP1P61758 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VBP1P61758 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VBP1P61758 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
VBP1P61758 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VBP1P61758 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
VBP1P61758 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VBP1P61758 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VBP1P61758 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VBP1P61758 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.66■□□□□ 0.74
VBP1P61758 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VBP1P61758 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VBP1P61758 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VBP1P61758 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
VBP1P61758 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.66■□□□□ 0.74
VBP1P61758 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VBP1P61758 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VBP1P61758 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VBP1P61758 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VBP1P61758 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VBP1P61758 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.65■□□□□ 0.74
VBP1P61758 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.65■□□□□ 0.74
VBP1P61758 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
VBP1P61758 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
VBP1P61758 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VBP1P61758 AC007952.6-201ENST00000573168 2673 ntBASIC19.65■□□□□ 0.74
VBP1P61758 AC003957.1-201ENST00000625108 2673 ntBASIC19.65■□□□□ 0.74
VBP1P61758 AC244015.2-201ENST00000616358 1861 ntBASIC19.65■□□□□ 0.74
VBP1P61758 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.74
VBP1P61758 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
VBP1P61758 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VBP1P61758 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.64■□□□□ 0.73
VBP1P61758 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.64■□□□□ 0.73
VBP1P61758 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VBP1P61758 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
VBP1P61758 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VBP1P61758 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.64■□□□□ 0.73
VBP1P61758 AF106564.1-201ENST00000607058 2553 ntBASIC19.64■□□□□ 0.73
VBP1P61758 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
VBP1P61758 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
VBP1P61758 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
VBP1P61758 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
VBP1P61758 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VBP1P61758 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.63■□□□□ 0.73
VBP1P61758 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VBP1P61758 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VBP1P61758 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VBP1P61758 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
VBP1P61758 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
VBP1P61758 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.63■□□□□ 0.73
VBP1P61758 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VBP1P61758 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VBP1P61758 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
VBP1P61758 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
VBP1P61758 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms