Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
WNT3AP56704 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
WNT3AP56704 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.24■■□□□ 1.15
WNT3AP56704 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
WNT3AP56704 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
WNT3AP56704 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
WNT3AP56704 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
WNT3AP56704 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
WNT3AP56704 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.23■■□□□ 1.15
WNT3AP56704 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
WNT3AP56704 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.23■■□□□ 1.15
WNT3AP56704 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
WNT3AP56704 AL117328.2-201ENST00000624617 1940 ntBASIC22.23■■□□□ 1.15
WNT3AP56704 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
WNT3AP56704 GUSBP5-202ENST00000510805 1989 ntBASIC22.23■■□□□ 1.15
WNT3AP56704 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
WNT3AP56704 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
WNT3AP56704 AC127496.7-201ENST00000625110 1798 ntBASIC22.22■■□□□ 1.15
WNT3AP56704 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
WNT3AP56704 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
WNT3AP56704 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.22■■□□□ 1.15
WNT3AP56704 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
WNT3AP56704 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
WNT3AP56704 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.22■■□□□ 1.15
WNT3AP56704 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
WNT3AP56704 AL138724.1-201ENST00000606771 1088 ntBASIC22.22■■□□□ 1.15
WNT3AP56704 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
WNT3AP56704 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.22■■□□□ 1.15
WNT3AP56704 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
WNT3AP56704 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
WNT3AP56704 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.22■■□□□ 1.15
WNT3AP56704 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
WNT3AP56704 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
WNT3AP56704 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.21■■□□□ 1.15
WNT3AP56704 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
WNT3AP56704 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
WNT3AP56704 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
WNT3AP56704 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
WNT3AP56704 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.21■■□□□ 1.15
WNT3AP56704 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.21■■□□□ 1.15
WNT3AP56704 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.21■■□□□ 1.15
WNT3AP56704 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
WNT3AP56704 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.21■■□□□ 1.15
WNT3AP56704 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.21■■□□□ 1.15
WNT3AP56704 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
WNT3AP56704 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
WNT3AP56704 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
WNT3AP56704 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
WNT3AP56704 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
WNT3AP56704 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
WNT3AP56704 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.2■■□□□ 1.14
WNT3AP56704 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
WNT3AP56704 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
WNT3AP56704 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
WNT3AP56704 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.2■■□□□ 1.14
WNT3AP56704 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.2■■□□□ 1.14
WNT3AP56704 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
WNT3AP56704 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.2■■□□□ 1.14
WNT3AP56704 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.2■■□□□ 1.14
WNT3AP56704 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
WNT3AP56704 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.2■■□□□ 1.14
WNT3AP56704 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
WNT3AP56704 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
WNT3AP56704 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
WNT3AP56704 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
WNT3AP56704 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
WNT3AP56704 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
WNT3AP56704 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
WNT3AP56704 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
WNT3AP56704 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
WNT3AP56704 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
WNT3AP56704 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.19■■□□□ 1.14
WNT3AP56704 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.19■■□□□ 1.14
WNT3AP56704 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.19■■□□□ 1.14
WNT3AP56704 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
WNT3AP56704 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.19■■□□□ 1.14
WNT3AP56704 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
WNT3AP56704 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
WNT3AP56704 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
WNT3AP56704 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.19■■□□□ 1.14
WNT3AP56704 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
WNT3AP56704 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
WNT3AP56704 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
WNT3AP56704 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.18■■□□□ 1.14
WNT3AP56704 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
WNT3AP56704 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
WNT3AP56704 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
WNT3AP56704 AC011298.3-201ENST00000615796 283 ntBASIC22.18■■□□□ 1.14
WNT3AP56704 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
WNT3AP56704 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
WNT3AP56704 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
WNT3AP56704 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
WNT3AP56704 UNC93B3-201ENST00000308076 687 ntBASIC22.17■■□□□ 1.14
WNT3AP56704 OR2I1P-207ENST00000453522 948 ntBASIC22.17■■□□□ 1.14
WNT3AP56704 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.17■■□□□ 1.14
WNT3AP56704 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.17■■□□□ 1.14
WNT3AP56704 AC136469.2-201ENST00000623944 1028 ntBASIC22.17■■□□□ 1.14
WNT3AP56704 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.17■■□□□ 1.14
WNT3AP56704 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
WNT3AP56704 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms