Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PER3P56645 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.18■□□□□ 0.82
PER3P56645 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PER3P56645 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PER3P56645 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
PER3P56645 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PER3P56645 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PER3P56645 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PER3P56645 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PER3P56645 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.17■□□□□ 0.82
PER3P56645 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PER3P56645 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.17■□□□□ 0.82
PER3P56645 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PER3P56645 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.17■□□□□ 0.82
PER3P56645 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PER3P56645 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PER3P56645 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.17■□□□□ 0.82
PER3P56645 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.17■□□□□ 0.82
PER3P56645 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PER3P56645 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.17■□□□□ 0.82
PER3P56645 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PER3P56645 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.16■□□□□ 0.82
PER3P56645 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
PER3P56645 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.16■□□□□ 0.82
PER3P56645 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PER3P56645 DUX4L2-201ENST00000561772 1275 ntBASIC20.16■□□□□ 0.82
PER3P56645 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
PER3P56645 DUX4L6-201ENST00000626483 1275 ntBASIC20.16■□□□□ 0.82
PER3P56645 DUX4L1-201ENST00000627662 1275 ntBASIC20.16■□□□□ 0.82
PER3P56645 DUX4L8-201ENST00000629013 1275 ntBASIC20.16■□□□□ 0.82
PER3P56645 DUX4L3-201ENST00000630187 1275 ntBASIC20.16■□□□□ 0.82
PER3P56645 DUX4L7-201ENST00000630678 1275 ntBASIC20.16■□□□□ 0.82
PER3P56645 DUX4L5-201ENST00000630834 1275 ntBASIC20.16■□□□□ 0.82
PER3P56645 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PER3P56645 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.16■□□□□ 0.82
PER3P56645 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PER3P56645 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PER3P56645 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PER3P56645 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PER3P56645 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.16■□□□□ 0.82
PER3P56645 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PER3P56645 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
PER3P56645 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
PER3P56645 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PER3P56645 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PER3P56645 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.15■□□□□ 0.82
PER3P56645 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PER3P56645 AC092437.1-201ENST00000624794 1048 ntBASIC20.15■□□□□ 0.82
PER3P56645 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PER3P56645 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PER3P56645 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PER3P56645 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PER3P56645 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PER3P56645 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.15■□□□□ 0.82
PER3P56645 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PER3P56645 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
PER3P56645 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.15■□□□□ 0.82
PER3P56645 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PER3P56645 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PER3P56645 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
PER3P56645 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.14■□□□□ 0.81
PER3P56645 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.14■□□□□ 0.81
PER3P56645 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.14■□□□□ 0.81
PER3P56645 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.14■□□□□ 0.81
PER3P56645 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PER3P56645 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PER3P56645 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PER3P56645 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.14■□□□□ 0.81
PER3P56645 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.14■□□□□ 0.81
PER3P56645 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PER3P56645 AL354811.1-201ENST00000610286 706 ntBASIC20.14■□□□□ 0.81
PER3P56645 AL031602.1-201ENST00000633169 911 ntBASIC20.14■□□□□ 0.81
PER3P56645 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PER3P56645 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.13■□□□□ 0.81
PER3P56645 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PER3P56645 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PER3P56645 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PER3P56645 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PER3P56645 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
PER3P56645 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PER3P56645 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PER3P56645 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PER3P56645 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
PER3P56645 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.13■□□□□ 0.81
PER3P56645 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.13■□□□□ 0.81
PER3P56645 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.13■□□□□ 0.81
PER3P56645 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.13■□□□□ 0.81
PER3P56645 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.13■□□□□ 0.81
PER3P56645 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PER3P56645 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.13■□□□□ 0.81
PER3P56645 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PER3P56645 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.13■□□□□ 0.81
PER3P56645 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PER3P56645 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PER3P56645 LINC01124-201ENST00000409786 2117 ntBASIC20.12■□□□□ 0.81
PER3P56645 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PER3P56645 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.12■□□□□ 0.81
PER3P56645 AL117328.2-201ENST00000624617 1940 ntBASIC20.12■□□□□ 0.81
PER3P56645 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
PER3P56645 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms