Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXC12P31275 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXC12P31275 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC12P31275 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC12P31275 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC12P31275 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
HOXC12P31275 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC12P31275 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC12P31275 AC022517.1-201ENST00000592429 346 ntBASIC19.41■□□□□ 0.7
HOXC12P31275 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC12P31275 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC12P31275 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC12P31275 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXC12P31275 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC12P31275 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC12P31275 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC12P31275 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC12P31275 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC12P31275 AC034268.1-201ENST00000441047 882 ntBASIC19.4■□□□□ 0.7
HOXC12P31275 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.4■□□□□ 0.7
HOXC12P31275 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.4■□□□□ 0.7
HOXC12P31275 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.4■□□□□ 0.7
HOXC12P31275 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.4■□□□□ 0.7
HOXC12P31275 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.4■□□□□ 0.7
HOXC12P31275 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC12P31275 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.4■□□□□ 0.7
HOXC12P31275 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC12P31275 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC12P31275 AC092068.2-201ENST00000590491 1708 ntBASIC19.39■□□□□ 0.7
HOXC12P31275 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.7
HOXC12P31275 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
HOXC12P31275 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC12P31275 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC12P31275 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.39■□□□□ 0.69
HOXC12P31275 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.39■□□□□ 0.69
HOXC12P31275 BX842568.3-201ENST00000418104 571 ntBASIC19.39■□□□□ 0.69
HOXC12P31275 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC12P31275 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.39■□□□□ 0.69
HOXC12P31275 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.39■□□□□ 0.69
HOXC12P31275 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC12P31275 IKBKGP1-201ENST00000612193 1073 ntBASIC19.39■□□□□ 0.69
HOXC12P31275 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
HOXC12P31275 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC12P31275 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC12P31275 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC12P31275 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC12P31275 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HOXC12P31275 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC12P31275 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.39■□□□□ 0.69
HOXC12P31275 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.39■□□□□ 0.69
HOXC12P31275 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.39■□□□□ 0.69
HOXC12P31275 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC12P31275 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.38■□□□□ 0.69
HOXC12P31275 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC12P31275 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.38■□□□□ 0.69
HOXC12P31275 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC12P31275 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
HOXC12P31275 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC12P31275 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.38■□□□□ 0.69
HOXC12P31275 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC12P31275 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
HOXC12P31275 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.38■□□□□ 0.69
HOXC12P31275 AC233992.3-201ENST00000607491 485 ntBASIC19.38■□□□□ 0.69
HOXC12P31275 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.38■□□□□ 0.69
HOXC12P31275 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.38■□□□□ 0.69
HOXC12P31275 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.38■□□□□ 0.69
HOXC12P31275 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC12P31275 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC12P31275 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC12P31275 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
HOXC12P31275 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC12P31275 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC12P31275 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC12P31275 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC12P31275 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC12P31275 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC12P31275 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.37■□□□□ 0.69
HOXC12P31275 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC12P31275 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC12P31275 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.37■□□□□ 0.69
HOXC12P31275 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.37■□□□□ 0.69
HOXC12P31275 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC12P31275 AC126544.1-201ENST00000580842 1059 ntBASIC19.37■□□□□ 0.69
HOXC12P31275 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
HOXC12P31275 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC12P31275 AL137784.2-201ENST00000607332 1000 ntBASIC19.37■□□□□ 0.69
HOXC12P31275 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC12P31275 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC12P31275 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC12P31275 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC12P31275 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC12P31275 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC12P31275 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC12P31275 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC12P31275 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC12P31275 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC12P31275 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC12P31275 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC12P31275 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.36■□□□□ 0.69
HOXC12P31275 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms